Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPL23AP56-201ENST00000460778 453 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC096741.1-201ENST00000472250 846 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFRAP16234 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 RNA5SP392-201ENST00000516905 112 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFRAP16234 BRD9P1-201ENST00000529855 560 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC021006.3-201ENST00000530771 192 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 OR5D15P-201ENST00000531671 942 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AC040174.2-201ENST00000602701 465 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 AL356490.1-201ENST00000623079 479 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AP001784.1-201ENST00000624107 428 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC006453.5-201ENST00000636451 619 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 DDX18P3-201ENST00000404856 2007 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 AC073429.2-201ENST00000569694 1444 ntBASIC5.12□□□□□ -1.59
PDGFRAP16234 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFRAP16234 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFRAP16234 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFRAP16234 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDGFRAP16234 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDGFRAP16234 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDGFRAP16234 RN7SKP103-201ENST00000363848 320 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AL133270.1-201ENST00000402635 279 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 RNA5SP345-201ENST00000410646 108 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 GTF2IP5-201ENST00000414608 731 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 MTND2P2-201ENST00000434633 945 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AC099063.2-201ENST00000446360 662 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 RPL31P44-201ENST00000447680 377 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 RPS3AP53-201ENST00000454716 778 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC007688.1-201ENST00000475592 759 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC083982.1-201ENST00000485679 344 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 CDH12P2-201ENST00000504393 298 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 GCSHP4-201ENST00000538792 439 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AC023158.1-201ENST00000561632 1025 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 SNORA74C-1-201ENST00000580726 201 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AC010424.2-201ENST00000607594 443 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 FAM25E-202ENST00000608562 189 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC015914.2-201ENST00000618167 288 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC145207.9-201ENST00000623802 325 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AL163152.1-201ENST00000642001 374 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 AL672167.1-204ENST00000641875 3017 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 AC053481.2-202ENST00000582394 1500 ntBASIC5.11□□□□□ -1.59
PDGFRAP16234 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFRAP16234 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFRAP16234 AC007382.1-201ENST00000624376 2618 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFRAP16234 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
PDGFRAP16234 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 SNORD115-48-201ENST00000364764 76 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PDGFRAP16234 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDGFRAP16234 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 ZNF965P-201ENST00000432501 817 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AL772161.1-201ENST00000439130 476 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC023512.1-201ENST00000444513 499 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC012512.1-201ENST00000446594 718 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFRAP16234 RPL7P16-201ENST00000479738 738 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC090686.1-201ENST00000481577 749 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 MTCO1P31-201ENST00000506355 492 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFRAP16234 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFRAP16234 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.1□□□□□ -1.59
PDGFRAP16234 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFRAP16234 DDX18P5-201ENST00000534547 1306 ntBASIC5.1□□□□□ -1.59
PDGFRAP16234 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFRAP16234 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFRAP16234 LSM3P2-201ENST00000551246 273 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms