Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 RNU6-249P-201ENST00000363016 102 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AL078604.1-201ENST00000404609 466 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 RNA5SP296-201ENST00000410523 111 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 ARL4AP3-201ENST00000441452 574 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 VN1R32P-201ENST00000452234 905 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 NDUFA12P1-201ENST00000455914 406 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC090589.1-201ENST00000473109 362 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 IGLVIV-65-201ENST00000517313 360 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 OR8G5-201ENST00000524943 1041 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 MIR4330-201ENST00000579077 105 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 AC053481.2-202ENST00000582394 1500 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.49□□□□□ -1.69
HLA-DQB2P05538 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB2P05538 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 OR6C64P-201ENST00000419708 825 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MTND2P28-201ENST00000457540 1044 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC096741.1-201ENST00000472250 846 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 RN7SL205P-201ENST00000490174 284 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC021733.2-201ENST00000518830 497 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MIR4715-201ENST00000584117 79 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 RN7SL52P-201ENST00000584271 284 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC026979.4-201ENST00000606555 645 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 RN7SL722P-201ENST00000617780 284 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 RN7SL565P-201ENST00000618246 284 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AC002044.3-201ENST00000623314 541 ntBASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB2P05538 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RNA5SP22-201ENST00000365393 109 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 TRAV35-201ENST00000390462 330 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RNA5SP372-201ENST00000390836 115 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC097374.1-203ENST00000400783 485 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RPL37P18-201ENST00000411602 243 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AL356387.2-201ENST00000422272 243 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC114495.1-201ENST00000441274 436 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC005008.1-201ENST00000456151 612 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RN7SL738P-201ENST00000470264 297 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RPL7AP10-201ENST00000481016 791 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 NPM1P29-201ENST00000483112 803 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC012158.1-204ENST00000483430 465 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 SETP1-201ENST00000556014 845 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC068831.4-201ENST00000556118 109 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC005034.4-201ENST00000603612 899 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC091979.2-201ENST00000607514 214 ntBASIC4.47□□□□□ -1.69
HLA-DQB2P05538 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms