Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 EIF2S2P5-201ENST00000457635 968 ntBASIC2.69□□□□□ -1.98
APOBP04114 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 CAB39P1-201ENST00000502277 460 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 AC005412.1-201ENST00000580812 1049 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC022146.1-201ENST00000595307 847 ntBASIC2.69□□□□□ -1.98
APOBP04114 MIMT1-201ENST00000597105 1050 ntBASIC2.69□□□□□ -1.98
APOBP04114 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.69□□□□□ -1.98
APOBP04114 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
APOBP04114 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
APOBP04114 AC008124.1-201ENST00000609803 9730 ntBASIC2.68□□□□□ -1.98
APOBP04114 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 OR11H4-201ENST00000315409 1082 ntBASIC2.68□□□□□ -1.98
APOBP04114 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 RNU1-63P-201ENST00000383902 164 ntBASIC2.68□□□□□ -1.98
APOBP04114 Z92545.1-201ENST00000411782 234 ntBASIC2.68□□□□□ -1.98
APOBP04114 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 NPM1P26-201ENST00000426339 738 ntBASIC2.68□□□□□ -1.98
APOBP04114 RPL7P4-203ENST00000430239 730 ntBASIC2.68□□□□□ -1.98
APOBP04114 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 ACTR3P3-201ENST00000480448 893 ntBASIC2.68□□□□□ -1.98
APOBP04114 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.68□□□□□ -1.98
APOBP04114 RPL21P12-201ENST00000559810 515 ntBASIC2.68□□□□□ -1.98
APOBP04114 AC027455.1-201ENST00000574104 594 ntBASIC2.68□□□□□ -1.98
APOBP04114 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOBP04114 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 AP005435.3-201ENST00000531260 3198 ntBASIC2.68□□□□□ -1.98
APOBP04114 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.68□□□□□ -1.98
APOBP04114 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 OR52E6-202ENST00000379946 954 ntBASIC2.68□□□□□ -1.98
APOBP04114 RN7SKP182-201ENST00000410772 298 ntBASIC2.68□□□□□ -1.98
APOBP04114 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC2.68□□□□□ -1.98
APOBP04114 AC026427.2-201ENST00000506228 536 ntBASIC2.68□□□□□ -1.98
APOBP04114 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AL592436.1-201ENST00000605135 558 ntBASIC2.68□□□□□ -1.98
APOBP04114 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 FRG1EP-201ENST00000634469 770 ntBASIC2.68□□□□□ -1.98
APOBP04114 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOBP04114 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 AC027228.2-201ENST00000567141 2154 ntBASIC2.68□□□□□ -1.98
APOBP04114 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOBP04114 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.68□□□□□ -1.98
APOBP04114 AC015967.1-201ENST00000619893 476 ntBASIC2.68□□□□□ -1.98
APOBP04114 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOBP04114 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.68□□□□□ -1.98
APOBP04114 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
APOBP04114 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
APOBP04114 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
APOBP04114 AL592156.1-201ENST00000508758 304 ntBASIC2.68□□□□□ -1.98
APOBP04114 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC2.68□□□□□ -1.98
APOBP04114 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC2.68□□□□□ -1.98
APOBP04114 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.68□□□□□ -1.98
APOBP04114 AC090912.3-201ENST00000609775 533 ntBASIC2.68□□□□□ -1.98
APOBP04114 AP005019.3-201ENST00000620418 560 ntBASIC2.68□□□□□ -1.98
APOBP04114 FP236240.3-201ENST00000623061 327 ntBASIC2.68□□□□□ -1.98
APOBP04114 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
APOBP04114 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
APOBP04114 AC092451.3-201ENST00000625067 1343 ntBASIC2.67□□□□□ -1.98
APOBP04114 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 ADAM5-202ENST00000399789 1942 ntBASIC2.67□□□□□ -1.98
APOBP04114 RN7SKP167-201ENST00000411047 285 ntBASIC2.67□□□□□ -1.98
APOBP04114 RPS20P14-201ENST00000412545 360 ntBASIC2.67□□□□□ -1.98
APOBP04114 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.67□□□□□ -1.98
APOBP04114 MRPL48P1-201ENST00000445390 636 ntBASIC2.67□□□□□ -1.98
APOBP04114 EIF4A2P2-201ENST00000455776 1070 ntBASIC2.67□□□□□ -1.98
APOBP04114 PRELID3BP6-201ENST00000503839 571 ntBASIC2.67□□□□□ -1.98
APOBP04114 RN7SKP157-201ENST00000516174 282 ntBASIC2.67□□□□□ -1.98
APOBP04114 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms