Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 VN1R83P-201ENST00000595685 445 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL022161.1-201ENST00000604390 213 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC010245.2-201ENST00000606908 1167 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC245008.1-201ENST00000608123 476 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC079097.1-201ENST00000512187 1399 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 AL360270.2-201ENST00000562952 5985 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS4BO75351 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC006206.1-201ENST00000544842 3387 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC006484.1-201ENST00000435086 1884 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC133552.1-201ENST00000569988 4007 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 ENSAP3-201ENST00000312710 333 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 Y_RNA.169-201ENST00000363745 96 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 SNORD116-1-201ENST00000384335 95 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 RNU6-452P-201ENST00000384406 107 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS4BO75351 SNORA40.2-201ENST00000390847 128 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL356131.1-201ENST00000405826 414 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 RN7SKP59-201ENST00000410520 314 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL445213.1-201ENST00000412589 747 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 TAF13P2-201ENST00000416876 286 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 RAC1P8-201ENST00000427086 527 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 FTLP19-201ENST00000433300 394 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 NDUFB4P8-201ENST00000435351 367 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 PTMAP6-201ENST00000439110 327 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC002542.1-201ENST00000440683 193 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC068135.1-201ENST00000446164 246 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 MTND1P29-201ENST00000448112 647 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC234781.3-201ENST00000452540 973 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC126121.1-201ENST00000482313 553 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC231760.1-201ENST00000498002 260 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 MRPS33P3-201ENST00000513456 322 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 HMGB1P1-201ENST00000522557 636 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 MTCO1P47-201ENST00000523889 1271 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC096996.1-201ENST00000563813 325 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL354943.1-201ENST00000572103 781 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 H3F3BP2-201ENST00000583907 357 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 Z99497.2-201ENST00000603634 310 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC018638.7-201ENST00000605836 1114 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC012557.2-201ENST00000605919 418 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC116651.1-201ENST00000609724 556 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AP000255.1-201ENST00000610276 676 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 Z95327.3-201ENST00000610385 572 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC024257.5-201ENST00000612739 531 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 STMN1P1-201ENST00000617809 440 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AL031595.2-201ENST00000624215 19071 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms