Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 VN1R83P-201ENST00000595685 445 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL022161.1-201ENST00000604390 213 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC010245.2-201ENST00000606908 1167 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC245008.1-201ENST00000608123 476 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC079097.1-201ENST00000512187 1399 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 AL360270.2-201ENST00000562952 5985 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS4BO75351 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC006206.1-201ENST00000544842 3387 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC006484.1-201ENST00000435086 1884 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC133552.1-201ENST00000569988 4007 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 ENSAP3-201ENST00000312710 333 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 Y_RNA.169-201ENST00000363745 96 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 SNORD116-1-201ENST00000384335 95 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 RNU6-452P-201ENST00000384406 107 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS4BO75351 SNORA40.2-201ENST00000390847 128 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL356131.1-201ENST00000405826 414 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 RN7SKP59-201ENST00000410520 314 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL445213.1-201ENST00000412589 747 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 TAF13P2-201ENST00000416876 286 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 RAC1P8-201ENST00000427086 527 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 FTLP19-201ENST00000433300 394 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 NDUFB4P8-201ENST00000435351 367 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 PTMAP6-201ENST00000439110 327 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC002542.1-201ENST00000440683 193 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC068135.1-201ENST00000446164 246 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 MTND1P29-201ENST00000448112 647 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC234781.3-201ENST00000452540 973 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC126121.1-201ENST00000482313 553 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC231760.1-201ENST00000498002 260 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 MRPS33P3-201ENST00000513456 322 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 HMGB1P1-201ENST00000522557 636 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 MTCO1P47-201ENST00000523889 1271 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC096996.1-201ENST00000563813 325 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AL354943.1-201ENST00000572103 781 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 H3F3BP2-201ENST00000583907 357 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4BO75351 Z99497.2-201ENST00000603634 310 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC018638.7-201ENST00000605836 1114 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC012557.2-201ENST00000605919 418 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC116651.1-201ENST00000609724 556 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AP000255.1-201ENST00000610276 676 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 Z95327.3-201ENST00000610385 572 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC024257.5-201ENST00000612739 531 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 STMN1P1-201ENST00000617809 440 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4BO75351 AL031595.2-201ENST00000624215 19071 ntBASIC5.48□□□□□ -1.53
VPS4BO75351 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4BO75351 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS4BO75351 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4BO75351 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms