Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC069285.2-201ENST00000440210 275 ntBASIC4.69□□□□□ -1.66
SNX3O60493 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.69□□□□□ -1.66
SNX3O60493 RNFT1P2-201ENST00000443064 757 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AL035551.1-201ENST00000446931 348 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX3O60493 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX3O60493 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 RN7SL214P-201ENST00000487317 265 ntBASIC4.69□□□□□ -1.66
SNX3O60493 HAUS1P1-201ENST00000505275 832 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AC093763.2-201ENST00000505334 1223 ntBASIC4.69□□□□□ -1.66
SNX3O60493 RNA5SP154-201ENST00000516193 111 ntBASIC4.69□□□□□ -1.66
SNX3O60493 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 AC093249.4-201ENST00000564755 259 ntBASIC4.69□□□□□ -1.66
SNX3O60493 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX3O60493 HMGB2P1-201ENST00000591146 634 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AC105254.2-201ENST00000603636 436 ntBASIC4.69□□□□□ -1.66
SNX3O60493 BNIP3P19-201ENST00000605397 577 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL133445.2-201ENST00000611191 527 ntBASIC4.69□□□□□ -1.66
SNX3O60493 MIR6889-201ENST00000613185 59 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AC095038.2-201ENST00000621464 1070 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AC145207.9-201ENST00000623802 325 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL138960.2-201ENST00000625145 535 ntBASIC4.69□□□□□ -1.66
SNX3O60493 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX3O60493 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX3O60493 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 RNU6-252P-201ENST00000363232 107 ntBASIC4.68□□□□□ -1.66
SNX3O60493 RNU6-609P-201ENST00000365459 107 ntBASIC4.68□□□□□ -1.66
SNX3O60493 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX3O60493 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
SNX3O60493 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX3O60493 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX3O60493 ATP5F1P6-201ENST00000402768 767 ntBASIC4.68□□□□□ -1.66
SNX3O60493 RN7SKP222-201ENST00000410651 315 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC010385.1-201ENST00000412374 256 ntBASIC4.68□□□□□ -1.66
SNX3O60493 TBCAP2-201ENST00000416175 326 ntBASIC4.68□□□□□ -1.66
SNX3O60493 RPL21P91-201ENST00000429231 479 ntBASIC4.68□□□□□ -1.66
SNX3O60493 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC110602.1-201ENST00000437414 318 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.68□□□□□ -1.66
SNX3O60493 OR7E125P-201ENST00000443450 846 ntBASIC4.68□□□□□ -1.66
SNX3O60493 KNOP1P3-201ENST00000446933 426 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 RPL35AP19-201ENST00000469425 329 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC100832.1-201ENST00000471945 383 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC015908.1-201ENST00000478739 476 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC090013.1-201ENST00000485147 480 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC008897.1-201ENST00000494006 347 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC113192.3-201ENST00000529152 742 ntBASIC4.68□□□□□ -1.66
SNX3O60493 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.68□□□□□ -1.66
SNX3O60493 AL049839.1-201ENST00000556151 657 ntBASIC4.68□□□□□ -1.66
SNX3O60493 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX3O60493 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX3O60493 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX3O60493 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC015911.5-201ENST00000587076 451 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.68□□□□□ -1.66
SNX3O60493 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC010424.2-201ENST00000607594 443 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC016542.1-201ENST00000608259 493 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AP001033.2-201ENST00000609701 1003 ntBASIC4.68□□□□□ -1.66
SNX3O60493 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX3O60493 AC244100.4-201ENST00000617747 388 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC048341.3-201ENST00000619323 491 ntBASIC4.68□□□□□ -1.66
SNX3O60493 AC006249.1-201ENST00000621223 471 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms