Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SOX1O00570 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.69□□□□□ -1.34
SOX1O00570 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SOX1O00570 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
SOX1O00570 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 AC027088.4-201ENST00000611559 1947 ntBASIC6.68□□□□□ -1.34
SOX1O00570 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
SOX1O00570 AP003119.3-201ENST00000566747 4192 ntBASIC6.68□□□□□ -1.34
SOX1O00570 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX1O00570 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 Y_RNA.573-201ENST00000384763 105 ntBASIC6.68□□□□□ -1.34
SOX1O00570 SNORA40.3-201ENST00000390964 122 ntBASIC6.68□□□□□ -1.34
SOX1O00570 RNA5SP156-201ENST00000410250 110 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 AL389915.1-201ENST00000422463 466 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX1O00570 AC093698.1-201ENST00000423843 571 ntBASIC6.68□□□□□ -1.34
SOX1O00570 TIMM9P3-201ENST00000428659 274 ntBASIC6.68□□□□□ -1.34
SOX1O00570 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 FTH1P16-201ENST00000435241 552 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC093716.1-201ENST00000435923 377 ntBASIC6.68□□□□□ -1.34
SOX1O00570 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX1O00570 OR7E125P-201ENST00000443450 846 ntBASIC6.68□□□□□ -1.34
SOX1O00570 DNAJC19P8-201ENST00000452887 259 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AL033528.1-201ENST00000453780 140 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX1O00570 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX1O00570 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX1O00570 OR2AO1P-201ENST00000476497 403 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC079080.1-201ENST00000479841 822 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC022206.1-201ENST00000495947 347 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 RNU6-416P-201ENST00000516265 103 ntBASIC6.68□□□□□ -1.34
SOX1O00570 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX1O00570 IGJP1-201ENST00000522682 475 ntBASIC6.68□□□□□ -1.34
SOX1O00570 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 OR5AQ1P-201ENST00000527596 927 ntBASIC6.68□□□□□ -1.34
SOX1O00570 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.68□□□□□ -1.34
SOX1O00570 AC137768.1-201ENST00000549998 553 ntBASIC6.68□□□□□ -1.34
SOX1O00570 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SOX1O00570 AP001004.1-201ENST00000582468 324 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC010327.2-201ENST00000587647 488 ntBASIC6.68□□□□□ -1.34
SOX1O00570 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.68□□□□□ -1.34
SOX1O00570 DUXAP4-201ENST00000603046 613 ntBASIC6.68□□□□□ -1.34
SOX1O00570 RNF138P2-201ENST00000603490 592 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC233280.2-201ENST00000603917 1070 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC008536.2-201ENST00000607284 349 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AL591167.1-201ENST00000607321 456 ntBASIC6.68□□□□□ -1.34
SOX1O00570 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 AL592295.2-201ENST00000612578 206 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AP002505.2-201ENST00000623585 696 ntBASIC6.68□□□□□ -1.34
SOX1O00570 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 MFSD8-217ENST00000641178 4374 ntBASIC6.68□□□□□ -1.34
SOX1O00570 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SOX1O00570 AC011592.1-201ENST00000624647 3634 ntBASIC6.68□□□□□ -1.34
SOX1O00570 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.68□□□□□ -1.34
SOX1O00570 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SOX1O00570 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 SPATA31C2-201ENST00000324915 3777 ntBASIC6.67□□□□□ -1.34
SOX1O00570 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SOX1O00570 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 RNU5D-1-201ENST00000363299 116 ntBASIC6.67□□□□□ -1.34
SOX1O00570 Y_RNA.402-201ENST00000383972 102 ntBASIC6.67□□□□□ -1.34
SOX1O00570 RNU6-297P-201ENST00000384636 107 ntBASIC6.67□□□□□ -1.34
SOX1O00570 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SOX1O00570 AL645733.1-201ENST00000402250 217 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AL356057.2-201ENST00000403318 432 ntBASIC6.67□□□□□ -1.34
SOX1O00570 MTCYBP36-201ENST00000404146 440 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms