Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 AC009135.2-201ENST00000624136 1768 ntBASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL139384.2-201ENST00000613809 3590 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AP002370.1-201ENST00000528055 1602 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AP000641.1-201ENST00000531988 1639 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 SNORA38B-201ENST00000363524 131 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-878P-201ENST00000384578 110 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 Z97832.1-201ENST00000402490 328 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC007394.1-201ENST00000421941 531 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL451136.1-201ENST00000435399 325 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL512593.1-201ENST00000444758 779 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC009963.3-201ENST00000458090 486 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 RNU6-1208P-201ENST00000459588 107 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 MTCO2P29-201ENST00000465212 189 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC011979.1-201ENST00000472300 483 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC072039.1-201ENST00000477611 581 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 MTCO2P24-201ENST00000515611 426 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC027667.1-201ENST00000545814 304 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC107954.1-201ENST00000565906 727 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC004805.3-201ENST00000603178 310 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL157899.1-201ENST00000604110 936 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL592494.3-201ENST00000609485 464 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL133215.3-201ENST00000609801 448 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL590282.1-201ENST00000610379 1136 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL136295.6-201ENST00000610486 658 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL592148.2-201ENST00000612210 372 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AL592295.2-201ENST00000612578 206 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 MIR6729-201ENST00000618194 65 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 MIR6811-201ENST00000620409 58 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01739-205ENST00000641890 573 ntBASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PDZRN3Q9UPQ7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
PDZRN3Q9UPQ7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.08
PDZRN3Q9UPQ7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AKAP17BP-201ENST00000431706 2719 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL117339.4-201ENST00000608335 7063 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RNA5SP333-201ENST00000363466 118 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RNA5SP334-201ENST00000364825 118 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-767P-201ENST00000384132 107 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RPS24P12-201ENST00000402084 394 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 MTCO2P33-201ENST00000402100 465 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 NCSTNP1-201ENST00000406229 144 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RPS15AP38-201ENST00000413110 372 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 TIMM9P3-201ENST00000428659 274 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms