Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DKK3Q9UBP4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 RNU4-68P-201ENST00000364314 141 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC009804.1-201ENST00000400949 179 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL021331.1-201ENST00000402817 582 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AP000534.2-201ENST00000412729 568 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 NPM1P4-201ENST00000414095 812 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL449283.1-202ENST00000418249 604 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 MORF4L1P6-201ENST00000418771 268 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 DSTNP5-201ENST00000427921 523 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 GTF2IP3-201ENST00000433887 494 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 MTND1P29-201ENST00000448112 647 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 PTGES3P5-201ENST00000455109 434 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 RN7SL799P-201ENST00000475891 298 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 RNA5SP34-201ENST00000516887 130 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 OR8I1P-201ENST00000529291 931 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 LRRC6P1-201ENST00000532188 885 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC122688.1-201ENST00000541494 223 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AP002373.2-201ENST00000541631 1060 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL442163.2-201ENST00000553912 710 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL035411.2-201ENST00000604022 421 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC079610.2-201ENST00000604818 690 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC037198.3-201ENST00000616754 526 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
DKK3Q9UBP4 AC239868.2-201ENST00000564237 4527 ntBASIC5.56□□□□□ -1.52
DKK3Q9UBP4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 U3.10-201ENST00000364459 214 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RNU6-31P-201ENST00000384388 108 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SNORA70-201ENST00000384436 135 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AL603865.2-201ENST00000401679 213 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RNU4-22P-201ENST00000411058 166 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 UBE2V1P11-201ENST00000411559 285 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RPL26P37-201ENST00000411983 438 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 UBE2V1P1-201ENST00000430836 445 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AL138787.1-202ENST00000437804 898 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RSL24D1P3-201ENST00000449255 495 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AL445669.2-201ENST00000454425 421 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RPL7P45-201ENST00000455851 743 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AC011225.1-201ENST00000457751 369 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 RNA5SP230-201ENST00000517039 122 ntBASIC5.55□□□□□ -1.52
DKK3Q9UBP4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.55□□□□□ -1.52
DKK3Q9UBP4 MTCO2P15-201ENST00000532655 656 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms