Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 CCT8P1-201ENST00000413611 1657 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL359922.3-201ENST00000624779 1670 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 MIR137-201ENST00000385223 102 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC007068.1-201ENST00000396690 844 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 BTG3P1-201ENST00000435859 716 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 FHP1-201ENST00000442741 703 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 TDGF1P1-201ENST00000445734 527 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 RPL23AP24-201ENST00000458203 385 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC090948.1-201ENST00000607464 549 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AC020634.1-201ENST00000608701 549 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 MLECP1-201ENST00000615893 709 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AL121890.3-201ENST00000618494 516 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 AL731532.2-201ENST00000623542 1953 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.94□□□□□ -1.62
NXF3Q9H4D5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.94□□□□□ -1.62
NXF3Q9H4D5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC107068.1-201ENST00000563286 4218 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 RNA5SP509-201ENST00000364577 119 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 TMSB10P2-201ENST00000416049 131 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC013268.2-201ENST00000420753 337 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AL356387.2-201ENST00000422272 243 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC023141.6-201ENST00000429418 337 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 RPL21P133-201ENST00000443666 476 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC104849.1-201ENST00000462623 405 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 RN7SKP5-201ENST00000517045 272 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC015912.2-201ENST00000571053 181 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 KPNA2P3-201ENST00000584190 848 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 AC011944.2-201ENST00000624440 683 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 OR2L1P-202ENST00000641567 1023 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 OR52H1-202ENST00000641796 1061 ntBASIC4.93□□□□□ -1.62
NXF3Q9H4D5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NXF3Q9H4D5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms