Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 AC005005.4-201ENST00000623789 16698 ntBASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHANK3Q9BYB0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 MIR3065-201ENST00000390137 79 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RN7SKP235-201ENST00000410662 305 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 SNORA74C-2-201ENST00000411179 201 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 HSFY1P1-201ENST00000423928 1178 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RPL5P2-201ENST00000429598 854 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 TMX2P1-201ENST00000436507 708 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 VN1R105P-201ENST00000486595 910 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 SRGNP1-201ENST00000603392 451 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AC008013.2-202ENST00000637965 364 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AL691449.1-201ENST00000426570 421 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AC016550.3-201ENST00000515706 767 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ZNF415P1-201ENST00000582279 1166 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 FRG1EP-201ENST00000634469 770 ntBASIC5.77□□□□□ -1.49
SHANK3Q9BYB0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 AP005435.3-201ENST00000531260 3198 ntBASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 RPL7P2-201ENST00000427639 268 ntBASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 RPS27AP17-201ENST00000463344 455 ntBASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 OR5BC1P-201ENST00000529327 739 ntBASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 AP000619.3-201ENST00000535634 1127 ntBASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHANK3Q9BYB0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 MIR7-3-201ENST00000384898 110 ntBASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AL117339.2-201ENST00000430475 180 ntBASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC005034.4-201ENST00000603612 899 ntBASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC010201.1-201ENST00000605051 540 ntBASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 MIR7151-201ENST00000617477 60 ntBASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHANK3Q9BYB0 AC100778.3-201ENST00000580060 1750 ntBASIC5.74□□□□□ -1.49
SHANK3Q9BYB0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHANK3Q9BYB0 MIR218-2-201ENST00000385006 110 ntBASIC5.74□□□□□ -1.49
SHANK3Q9BYB0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHANK3Q9BYB0 Z92545.1-201ENST00000411782 234 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms