Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC079097.1-201ENST00000512187 1399 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 AL353743.4-201ENST00000422653 1547 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AL022393.1-201ENST00000625142 1677 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSX3Q99909 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSX3Q99909 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 RNU6-650P-201ENST00000365658 111 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSX3Q99909 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC007161.1-204ENST00000423039 460 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 NANOGP4-201ENST00000427230 913 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RPL7AP49-201ENST00000429522 581 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AL591438.1-201ENST00000433508 581 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 MED6P1-201ENST00000439659 713 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 IGBP1P3-201ENST00000447449 1000 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RPL7P31-201ENST00000450192 724 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 TPMTP4-201ENST00000450749 678 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 PRPF38AP1-201ENST00000451976 933 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 CYCSP53-201ENST00000455540 265 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 NPM1P17-201ENST00000479221 602 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RN7SL30P-201ENST00000488416 306 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RN7SL447P-201ENST00000494711 245 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX3Q99909 RNU6-1102P-201ENST00000516149 96 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RNA5SP34-201ENST00000516887 130 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 OR5AM1P-201ENST00000532136 1032 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 OSBPL9P3-201ENST00000534523 595 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 AL049779.2-201ENST00000553847 315 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC025918.2-201ENST00000558683 763 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC011477.5-201ENST00000586571 259 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 NF1P5-201ENST00000588287 448 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 ZNF92P3-201ENST00000596594 954 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 ZNF92P2-201ENST00000600543 1059 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 IMMP1LP3-201ENST00000604197 224 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC013244.1-201ENST00000604279 193 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.42□□□□□ -1.7
SSX3Q99909 SDR42E1P1-201ENST00000611327 477 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AL512506.1-201ENST00000613918 449 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AL445493.3-201ENST00000619568 477 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 AC136428.4-201ENST00000634254 1155 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 FRG1DP-201ENST00000635586 771 ntBASIC4.42□□□□□ -1.7
SSX3Q99909 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SSX3Q99909 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.42□□□□□ -1.7
SSX3Q99909 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSX3Q99909 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSX3Q99909 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX3Q99909 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 AL512283.1-201ENST00000606756 1384 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSX3Q99909 AL133268.1-201ENST00000405676 1401 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 HMGB1P10-201ENST00000395823 563 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 RNU2-17P-201ENST00000410290 190 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 TATDN1P1-201ENST00000414123 891 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 BX119904.1-201ENST00000432026 348 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.41□□□□□ -1.7
SSX3Q99909 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.41□□□□□ -1.7
SSX3Q99909 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.41□□□□□ -1.7
SSX3Q99909 EIF2S2P5-201ENST00000457635 968 ntBASIC4.41□□□□□ -1.7
SSX3Q99909 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms