Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC087477.6-201ENST00000559595 843 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 LINC00901.1-201ENST00000617252 152 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC015914.2-201ENST00000618167 288 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 MAPK10-349ENST00000641767 3661 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 U3.35-201ENST00000408405 208 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 TMBIM7P-201ENST00000418074 855 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 VN1R37P-201ENST00000419096 748 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 EIF4HP2-201ENST00000424380 563 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 CYCSP11-201ENST00000436426 315 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 GTF3AP5-201ENST00000442645 697 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC007686.1-201ENST00000488511 463 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 DYNLL1P4-201ENST00000549314 266 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 FKBP1BP1-201ENST00000553366 325 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AL110118.1-201ENST00000553543 400 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC133552.5-201ENST00000604266 540 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC073137.1-201ENST00000605636 634 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AL135786.2-201ENST00000608422 615 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC011815.3-201ENST00000624194 473 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 VN2R3P-201ENST00000422626 1412 ntBASIC4.88□□□□□ -1.63
RPRD1AQ96P16 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPRD1AQ96P16 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC008549.2-201ENST00000333482 706 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 CYB5AP4-201ENST00000396692 399 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 GLUD1P9-201ENST00000420997 1173 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 RPL36AP15-201ENST00000444514 266 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AL133244.1-201ENST00000456007 258 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 BTG4P1-201ENST00000510421 183 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 CDH12P4-201ENST00000517835 295 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 CDH12P3-201ENST00000517935 295 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 CDH12P1-201ENST00000518435 295 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 AC063949.1-201ENST00000552900 865 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 RN7SL652P-201ENST00000577769 300 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 FAM106CP-201ENST00000582212 507 ntBASIC4.87□□□□□ -1.63
RPRD1AQ96P16 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPRD1AQ96P16 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms