Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 OSBPL9P3-201ENST00000534523 595 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 OR5AN2P-201ENST00000534535 896 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC018695.5-201ENST00000605872 315 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC004477.3-201ENST00000614061 590 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 MIR8080-201ENST00000622224 89 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC000123.2-201ENST00000623124 461 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC016717.3-201ENST00000624730 554 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC074101.1-201ENST00000637861 241 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL139811.1-201ENST00000424779 2299 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AL592182.3-201ENST00000642132 3304 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC063976.2-201ENST00000425667 3556 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC017079.1-201ENST00000333650 415 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 OR8V1P-201ENST00000395193 873 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 RPS24P12-201ENST00000402084 394 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 U3.32-201ENST00000408116 212 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 RN7SKP199-201ENST00000410325 305 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC007738.1-201ENST00000413892 348 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 CEACAMP1-201ENST00000434624 1035 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 BTF3P6-201ENST00000448054 499 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 RANP1-206ENST00000455094 651 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 RPL7P45-201ENST00000455851 743 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 RPL35AP19-201ENST00000469425 329 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 TRBV8-2-201ENST00000475637 270 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC008562.1-201ENST00000521763 330 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 IGKV3D-34-201ENST00000522638 302 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 OR5AK3P-201ENST00000527486 1297 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 RN7SL52P-201ENST00000584271 284 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC011445.2-201ENST00000599274 173 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC115621.1-201ENST00000604653 858 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AL359513.1-201ENST00000614364 557 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC118658.2-201ENST00000618697 459 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 AP000843.1-201ENST00000624880 701 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 ATE1-AS1-202ENST00000636460 506 ntBASIC4.66□□□□□ -1.66
PTP4A1Q93096 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTP4A1Q93096 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTP4A1Q93096 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.65□□□□□ -1.66
PTP4A1Q93096 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.65□□□□□ -1.66
PTP4A1Q93096 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PTP4A1Q93096 OR14L1P-202ENST00000641545 3009 ntBASIC4.65□□□□□ -1.66
PTP4A1Q93096 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PTP4A1Q93096 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTP4A1Q93096 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.65□□□□□ -1.66
PTP4A1Q93096 MUC2-202ENST00000613187 4845 ntBASIC4.65□□□□□ -1.66
PTP4A1Q93096 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTP4A1Q93096 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTP4A1Q93096 OR52B1P-201ENST00000316506 909 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 RNU6-984P-201ENST00000363236 109 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 RNA5SP242-201ENST00000364171 118 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.65□□□□□ -1.67
PTP4A1Q93096 AC005522.1-201ENST00000395416 346 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 AL390316.1-201ENST00000406279 553 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 SNORA11.3-201ENST00000408471 128 ntBASIC4.65□□□□□ -1.67
PTP4A1Q93096 AC023347.2-201ENST00000433994 462 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms