Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPS6P15-201ENST00000431996 751 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RPL7P34-201ENST00000433316 712 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 BX679664.2-201ENST00000439282 283 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 YWHAZP2-201ENST00000440317 728 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 MRPL35P2-201ENST00000448009 511 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 CALM1P2-201ENST00000452941 448 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC097484.1-201ENST00000471148 389 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC023050.1-201ENST00000498198 304 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC008837.1-201ENST00000511513 412 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RN7SKP288-201ENST00000516227 268 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 IGLV3-24-201ENST00000517477 197 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 IGHV3-63-201ENST00000518422 341 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 HMGB1P1-201ENST00000522557 636 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AP002373.2-201ENST00000541631 1060 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC091515.1-201ENST00000548110 679 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 HMGN2P47-201ENST00000559378 272 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC005377.1-201ENST00000605126 456 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AP004607.9-201ENST00000618202 316 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AP002782.1-201ENST00000623107 614 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC024023.1-201ENST00000624530 922 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AL133268.1-201ENST00000405676 1401 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC092070.2-203ENST00000598377 3644 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 MT-TP-201ENST00000387461 68 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 Y_RNA.578-201ENST00000390903 88 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 LRRC37BP1-201ENST00000398851 714 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC119751.3-201ENST00000399720 670 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC010385.1-201ENST00000412374 256 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 CHEK2P3-201ENST00000416118 248 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 KRR1P1-201ENST00000419430 803 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 PTGES3P1-201ENST00000439531 483 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 MTND2P22-201ENST00000444325 1033 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 CDC27P1-201ENST00000445384 715 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC004263.1-201ENST00000479327 332 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 CDH12P2-201ENST00000504393 298 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC026402.1-201ENST00000513642 170 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 RN7SKP122-201ENST00000515923 296 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 OR8I1P-201ENST00000529291 931 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 MIR4675-201ENST00000577898 77 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 PCNAP1-202ENST00000595299 752 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC025588.2-201ENST00000604851 466 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC092954.1-201ENST00000609121 445 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AC108359.1-201ENST00000616451 1211 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AL359757.1-201ENST00000623176 255 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AP002967.1-201ENST00000624203 539 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 MTCO1P15-201ENST00000529569 1526 ntBASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMC1BQ8NDV3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 AC140134.1-201ENST00000511830 3544 ntBASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMC1BQ8NDV3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms