Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC008115.3-201ENST00000614874 549 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 RNU6-1339P-201ENST00000363574 91 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 SNORA16A-201ENST00000384342 137 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 MIR551A-201ENST00000385042 96 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 RNU2-50P-201ENST00000410494 143 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 OR6E1P-201ENST00000414424 923 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 RPL6P29-201ENST00000414863 865 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 ELOCP6-201ENST00000429066 328 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 RPL23AP19-201ENST00000436229 369 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AL450996.1-201ENST00000445574 1202 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 MTND2P8-201ENST00000450555 1025 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 TPMTP4-201ENST00000450749 678 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 ELOCP12-201ENST00000458706 328 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC007998.1-201ENST00000474156 672 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 HMGB1P19-201ENST00000517578 577 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 EIF1P6-201ENST00000600054 334 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AL022067.1-201ENST00000602426 454 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC244107.2-201ENST00000611773 76 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC026124.2-201ENST00000621847 656 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AP002967.1-201ENST00000624203 539 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC38Q502W7 NSRP1P1-201ENST00000444067 1693 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 AC114947.2-201ENST00000565748 2125 ntBASIC5.53□□□□□ -1.52
CCDC38Q502W7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC38Q502W7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AL034370.1-201ENST00000397254 1590 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RNA5SP46-201ENST00000362370 120 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RNU4-44P-201ENST00000363050 141 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC38Q502W7 OR2AT2P-201ENST00000413438 905 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 LIPT1P1-201ENST00000415870 1186 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC009302.1-201ENST00000417147 390 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RPL34P3-201ENST00000421454 338 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC099336.2-201ENST00000422457 254 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 PPIAP13-201ENST00000434706 478 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC092013.1-201ENST00000438795 332 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC002542.1-201ENST00000440683 193 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC019185.1-201ENST00000442718 389 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 TPTE2P6-202ENST00000445572 1007 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RPS26P41-201ENST00000450370 284 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC099560.2-201ENST00000457554 255 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RN7SL809P-201ENST00000482040 297 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC38Q502W7 RPS12P31-201ENST00000491419 398 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RPS24P16-201ENST00000497294 392 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AL035404.1-201ENST00000497982 568 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC147055.3-201ENST00000510547 851 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 AC109464.1-201ENST00000511091 819 ntBASIC5.52□□□□□ -1.53
CCDC38Q502W7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms