Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AL133243.3-201ENST00000617415 3004 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HSPG2P98160 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC114495.1-201ENST00000441274 436 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AL935212.3-201ENST00000450729 284 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 RPS20P21-201ENST00000466859 343 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AC105233.3-201ENST00000531125 744 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC027455.1-201ENST00000574104 594 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AC090312.1-201ENST00000580637 348 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC010680.3-201ENST00000604215 520 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 UQCRC2P1-201ENST00000417777 1332 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AC109446.4-201ENST00000623235 2755 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AC007529.1-201ENST00000418574 2178 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 AL031119.1-201ENST00000404707 1879 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 RNA5SP241-201ENST00000391326 114 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AL590806.1-201ENST00000415818 853 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HSPG2P98160 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.69□□□□□ -1.98
HSPG2P98160 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 AC010608.2-201ENST00000624830 470 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 AL079305.1-201ENST00000623159 3008 ntBASIC2.69□□□□□ -1.98
HSPG2P98160 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HSPG2P98160 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.69□□□□□ -1.98
HSPG2P98160 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HSPG2P98160 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
HSPG2P98160 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HSPG2P98160 RNU6-213P-201ENST00000384051 104 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AL691449.1-201ENST00000426570 421 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AC006994.1-201ENST00000438212 839 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
HSPG2P98160 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 AC005972.3-201ENST00000606304 481 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 AC007159.1-201ENST00000566529 4706 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 UG0898H09-202ENST00000623646 7040 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 AC092681.1-201ENST00000297369 291 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 OR11H4-201ENST00000315409 1082 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HSPG2P98160 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HSPG2P98160 RPL6P29-201ENST00000414863 865 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 RPL7P33-201ENST00000444159 742 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HSPG2P98160 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.68□□□□□ -1.98
HSPG2P98160 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 MTND5P1-201ENST00000445440 1375 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HSPG2P98160 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC2.68□□□□□ -1.98
HSPG2P98160 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.68□□□□□ -1.98
HSPG2P98160 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC2.68□□□□□ -1.98
HSPG2P98160 MFSD8-242ENST00000641690 4199 ntBASIC2.68□□□□□ -1.98
HSPG2P98160 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HSPG2P98160 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms