Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL731566.1-201ENST00000620490 1937 ntBASIC5.4□□□□□ -1.55
CCNA1P78396 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 AC003985.2-201ENST00000562268 1669 ntBASIC5.4□□□□□ -1.55
CCNA1P78396 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNA1P78396 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CCNA1P78396 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CCNA1P78396 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 OR14L1P-202ENST00000641545 3009 ntBASIC5.4□□□□□ -1.55
CCNA1P78396 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 MFSD8-242ENST00000641690 4199 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNA1P78396 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCNA1P78396 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCNA1P78396 OR4K17-201ENST00000315543 1032 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCNA1P78396 RNA5SP479-201ENST00000364858 117 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 RAB9AP4-201ENST00000415230 609 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 NPM1P33-201ENST00000438918 872 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNA1P78396 RPL23AP24-201ENST00000458203 385 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC007537.2-201ENST00000472093 511 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 AC104763.1-201ENST00000475274 360 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AL049874.2-201ENST00000492636 288 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 RPL36AP41-201ENST00000493820 306 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC007016.1-201ENST00000512110 244 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNA1P78396 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.39□□□□□ -1.55
CCNA1P78396 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 AC074050.1-201ENST00000563247 211 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNA1P78396 AC115286.1-201ENST00000604298 434 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC011815.3-201ENST00000624194 473 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC011944.2-201ENST00000624440 683 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.39□□□□□ -1.55
CCNA1P78396 BTBD10P1-201ENST00000549824 1352 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 AC026523.2-201ENST00000625039 7739 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CCNA1P78396 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.39□□□□□ -1.55
CCNA1P78396 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNA1P78396 AC125257.1-201ENST00000560400 2930 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC011447.7-201ENST00000624228 1590 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CCNA1P78396 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.38□□□□□ -1.55
CCNA1P78396 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 AC079809.1-201ENST00000415468 276 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 GLUD1P9-201ENST00000420997 1173 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 PRPF38AP1-201ENST00000451976 933 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 AC100784.1-201ENST00000522790 310 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.38□□□□□ -1.55
CCNA1P78396 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 AL109766.1-201ENST00000555080 552 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC006349.1-201ENST00000555526 235 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC068831.4-201ENST00000556118 109 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC093249.4-201ENST00000564755 259 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 MIR3939-201ENST00000582614 106 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC073137.1-201ENST00000605636 634 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC090948.1-201ENST00000607464 549 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.38□□□□□ -1.55
CCNA1P78396 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.38□□□□□ -1.55
CCNA1P78396 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCNA1P78396 AC025031.4-201ENST00000621248 3271 ntBASIC5.38□□□□□ -1.55
CCNA1P78396 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCNA1P78396 OR6C69P-201ENST00000394268 893 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms