Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.11□□□□□ -1.75
ACTBP60709 RNA5SP392-201ENST00000516905 112 ntBASIC4.11□□□□□ -1.75
ACTBP60709 RN7SKP260-201ENST00000516907 149 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 NMNAT1P1-201ENST00000554095 876 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC027455.1-201ENST00000574104 594 ntBASIC4.11□□□□□ -1.75
ACTBP60709 EIF1P5-201ENST00000585002 234 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.11□□□□□ -1.75
ACTBP60709 SUMO2P15-201ENST00000604285 278 ntBASIC4.11□□□□□ -1.75
ACTBP60709 ELOCP34-201ENST00000604436 327 ntBASIC4.11□□□□□ -1.75
ACTBP60709 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 AC099494.2-201ENST00000623371 978 ntBASIC4.11□□□□□ -1.75
ACTBP60709 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.11□□□□□ -1.75
ACTBP60709 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.11□□□□□ -1.75
ACTBP60709 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ACTBP60709 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 HCFC2P1-201ENST00000392864 1592 ntBASIC4.1□□□□□ -1.75
ACTBP60709 CASC19-281ENST00000642118 1554 ntBASIC4.1□□□□□ -1.75
ACTBP60709 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 AC015813.6-201ENST00000624409 5808 ntBASIC4.1□□□□□ -1.75
ACTBP60709 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 RNU4-7P-201ENST00000364758 141 ntBASIC4.1□□□□□ -1.75
ACTBP60709 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 OR2X1P-201ENST00000421144 687 ntBASIC4.1□□□□□ -1.75
ACTBP60709 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ACTBP60709 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.1□□□□□ -1.75
ACTBP60709 AL355433.1-201ENST00000422804 300 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AC093414.1-201ENST00000434712 514 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 TCEA1P1-201ENST00000449716 880 ntBASIC4.1□□□□□ -1.75
ACTBP60709 IGHV5-78-201ENST00000450948 295 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AURKAPS1-201ENST00000451805 1212 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 AL389915.2-201ENST00000454576 441 ntBASIC4.1□□□□□ -1.75
ACTBP60709 FGF7P3-201ENST00000454645 303 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 RPS18P6-201ENST00000476880 458 ntBASIC4.1□□□□□ -1.75
ACTBP60709 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.1□□□□□ -1.75
ACTBP60709 VWA8P1-201ENST00000510889 176 ntBASIC4.1□□□□□ -1.75
ACTBP60709 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 OR4A46P-201ENST00000527255 933 ntBASIC4.1□□□□□ -1.75
ACTBP60709 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 AC025423.2-201ENST00000537570 439 ntBASIC4.1□□□□□ -1.75
ACTBP60709 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.1□□□□□ -1.75
ACTBP60709 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.1□□□□□ -1.75
ACTBP60709 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.1□□□□□ -1.75
ACTBP60709 MIR1269B-201ENST00000580405 75 ntBASIC4.1□□□□□ -1.75
ACTBP60709 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 AC005520.3-201ENST00000602874 370 ntBASIC4.1□□□□□ -1.75
ACTBP60709 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.1□□□□□ -1.75
ACTBP60709 MIR6886-201ENST00000619864 61 ntBASIC4.1□□□□□ -1.75
ACTBP60709 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.1□□□□□ -1.75
ACTBP60709 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 AL136164.3-201ENST00000624429 3978 ntBASIC4.1□□□□□ -1.75
ACTBP60709 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTBP60709 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
ACTBP60709 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 AC134882.1-201ENST00000603738 1676 ntBASIC4.1□□□□□ -1.75
ACTBP60709 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ACTBP60709 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.75
ACTBP60709 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.09□□□□□ -1.75
ACTBP60709 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ACTBP60709 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.09□□□□□ -1.75
ACTBP60709 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 OR56B2P-201ENST00000317102 954 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
ACTBP60709 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.09□□□□□ -1.75
ACTBP60709 RAB9AP4-201ENST00000415230 609 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.09□□□□□ -1.75
ACTBP60709 AC005033.1-201ENST00000428904 813 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms