Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VCPP55072 RNU4-39P-201ENST00000362455 127 ntBASIC5.25□□□□□ -1.57
VCPP55072 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 HMGB3P7-201ENST00000400214 611 ntBASIC5.25□□□□□ -1.57
VCPP55072 RN7SKP100-201ENST00000411258 284 ntBASIC5.25□□□□□ -1.57
VCPP55072 AC007559.1-201ENST00000428736 355 ntBASIC5.25□□□□□ -1.57
VCPP55072 HMGB3P10-201ENST00000434734 572 ntBASIC5.25□□□□□ -1.57
VCPP55072 NPM1P33-201ENST00000438918 872 ntBASIC5.25□□□□□ -1.57
VCPP55072 AL450263.2-201ENST00000439400 589 ntBASIC5.25□□□□□ -1.57
VCPP55072 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 EIF2S2P2-201ENST00000447161 982 ntBASIC5.25□□□□□ -1.57
VCPP55072 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.25□□□□□ -1.57
VCPP55072 AC010326.1-201ENST00000462726 602 ntBASIC5.25□□□□□ -1.57
VCPP55072 RPL12P20-201ENST00000475538 479 ntBASIC5.25□□□□□ -1.57
VCPP55072 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.25□□□□□ -1.57
VCPP55072 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 AP001960.1-201ENST00000506494 658 ntBASIC5.25□□□□□ -1.57
VCPP55072 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
VCPP55072 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 RNA5SP43-201ENST00000516559 110 ntBASIC5.25□□□□□ -1.57
VCPP55072 RNU4-18P-201ENST00000516751 149 ntBASIC5.25□□□□□ -1.57
VCPP55072 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
VCPP55072 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.25□□□□□ -1.57
VCPP55072 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.25□□□□□ -1.57
VCPP55072 GLRXP2-201ENST00000555594 321 ntBASIC5.25□□□□□ -1.57
VCPP55072 AC096553.1-201ENST00000605169 829 ntBASIC5.25□□□□□ -1.57
VCPP55072 SNORA35B-201ENST00000607417 129 ntBASIC5.25□□□□□ -1.57
VCPP55072 AC021106.3-201ENST00000623925 531 ntBASIC5.25□□□□□ -1.57
VCPP55072 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VCPP55072 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.25□□□□□ -1.57
VCPP55072 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VCPP55072 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
VCPP55072 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 AC025750.1-201ENST00000399891 379 ntBASIC5.24□□□□□ -1.57
VCPP55072 AL035696.2-201ENST00000407941 709 ntBASIC5.24□□□□□ -1.57
VCPP55072 RNU4-25P-201ENST00000410569 230 ntBASIC5.24□□□□□ -1.57
VCPP55072 RN7SKP97-201ENST00000410966 333 ntBASIC5.24□□□□□ -1.57
VCPP55072 RN7SKP247-201ENST00000411094 308 ntBASIC5.24□□□□□ -1.57
VCPP55072 RN7SKP263-201ENST00000411194 309 ntBASIC5.24□□□□□ -1.57
VCPP55072 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.24□□□□□ -1.57
VCPP55072 RPL7P11-201ENST00000437586 658 ntBASIC5.24□□□□□ -1.57
VCPP55072 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
VCPP55072 IGHV5-78-201ENST00000450948 295 ntBASIC5.24□□□□□ -1.57
VCPP55072 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 AL356390.1-201ENST00000455684 397 ntBASIC5.24□□□□□ -1.57
VCPP55072 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 RN7SL443P-201ENST00000464331 290 ntBASIC5.24□□□□□ -1.57
VCPP55072 AL133372.1-201ENST00000493565 745 ntBASIC5.24□□□□□ -1.57
VCPP55072 GAPDHP56-201ENST00000506031 988 ntBASIC5.24□□□□□ -1.57
VCPP55072 HNRNPRP2-201ENST00000528421 743 ntBASIC5.24□□□□□ -1.57
VCPP55072 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.24□□□□□ -1.57
VCPP55072 AC116553.2-201ENST00000564203 463 ntBASIC5.24□□□□□ -1.57
VCPP55072 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.24□□□□□ -1.57
VCPP55072 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 KPNA2P3-201ENST00000584190 848 ntBASIC5.24□□□□□ -1.57
VCPP55072 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 HSPA8P17-201ENST00000427029 1382 ntBASIC5.24□□□□□ -1.57
VCPP55072 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VCPP55072 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.24□□□□□ -1.57
VCPP55072 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VCPP55072 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.24□□□□□ -1.57
VCPP55072 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VCPP55072 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VCPP55072 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VCPP55072 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 MIR298-201ENST00000401212 88 ntBASIC5.23□□□□□ -1.57
VCPP55072 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 AL592293.2-201ENST00000422292 996 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms