Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 RN7SL176P-201ENST00000580352 264 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGCS2P54868 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCS2P54868 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AC008033.1-201ENST00000216407 1162 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 OR5P1P-201ENST00000299512 925 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCS2P54868 RNA5SP366-201ENST00000365454 123 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AC013268.2-201ENST00000420753 337 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCS2P54868 EIF4HP2-201ENST00000424380 563 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCS2P54868 OR4C10P-201ENST00000434991 931 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 RPL23AP43-201ENST00000446445 471 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC053481.1-201ENST00000467217 306 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC090686.1-201ENST00000481577 749 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC041039.1-201ENST00000485656 536 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS2P54868 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AP003730.1-201ENST00000524605 285 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AC106785.1-201ENST00000565935 262 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AP005901.4-201ENST00000577336 569 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC127024.5-201ENST00000580085 462 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGCS2P54868 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCS2P54868 RNU6-84P-201ENST00000607737 102 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGCS2P54868 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 AP003497.2-201ENST00000624220 967 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 MIR3653-201ENST00000625572 110 ntBASIC5.25□□□□□ -1.57
HMGCS2P54868 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCS2P54868 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS2P54868 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS2P54868 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGCS2P54868 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HMGCS2P54868 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGCS2P54868 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC025750.1-201ENST00000399891 379 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS2P54868 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS2P54868 DHFRP3-201ENST00000455595 559 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 SNRPCP3-201ENST00000474888 476 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 MIR2116-201ENST00000517221 80 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS2P54868 OR8A2P-201ENST00000528631 952 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS2P54868 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC006065.6-201ENST00000625201 545 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 AC138627.1-204ENST00000641894 765 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC005261.4-201ENST00000600047 1385 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS2P54868 AC010300.1-201ENST00000600671 5134 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 AC015813.6-201ENST00000624409 5808 ntBASIC5.24□□□□□ -1.57
HMGCS2P54868 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS2P54868 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 RNU1-132P-201ENST00000364300 164 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNU6-167P-201ENST00000384292 106 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 MIR134-201ENST00000385258 73 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNA5SP317-201ENST00000410176 116 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNA5SP311-201ENST00000411290 116 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms