Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
BRCA1P38398 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
BRCA1P38398 AL935212.3-201ENST00000450729 284 ntBASIC5.44□□□□□ -1.54
BRCA1P38398 RNA5SP246-201ENST00000458909 119 ntBASIC5.44□□□□□ -1.54
BRCA1P38398 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.44□□□□□ -1.54
BRCA1P38398 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
BRCA1P38398 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
BRCA1P38398 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRCA1P38398 AL137058.3-201ENST00000624531 3099 ntBASIC5.44□□□□□ -1.54
BRCA1P38398 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.44□□□□□ -1.54
BRCA1P38398 AC032011.1-201ENST00000611703 1549 ntBASIC5.44□□□□□ -1.54
BRCA1P38398 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRCA1P38398 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 KRR1P1-201ENST00000419430 803 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 MFSD13B-201ENST00000420133 1290 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 AL050321.1-201ENST00000432363 400 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.43□□□□□ -1.54
BRCA1P38398 AC007179.3-201ENST00000604976 235 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 AC007546.1-201ENST00000619452 559 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCA1P38398 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 AP005435.3-201ENST00000531260 3198 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRCA1P38398 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCA1P38398 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCA1P38398 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRCA1P38398 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.43□□□□□ -1.54
BRCA1P38398 AC114495.1-201ENST00000441274 436 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 AL500522.2-201ENST00000448562 343 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 SNORA59A-201ENST00000459326 152 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 ABCC13-202ENST00000463099 3842 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCA1P38398 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.43□□□□□ -1.54
BRCA1P38398 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.43□□□□□ -1.54
BRCA1P38398 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.43□□□□□ -1.54
BRCA1P38398 BPIFA4P-203ENST00000603168 689 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 PCA3_2.1-201ENST00000612507 409 ntBASIC5.43□□□□□ -1.54
BRCA1P38398 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
BRCA1P38398 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
BRCA1P38398 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRCA1P38398 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.42□□□□□ -1.54
BRCA1P38398 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
BRCA1P38398 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
BRCA1P38398 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.42□□□□□ -1.54
BRCA1P38398 AL133243.3-201ENST00000617415 3004 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 COX5BP7-201ENST00000414780 274 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 AL590806.1-201ENST00000415818 853 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 CKS1BP6-201ENST00000424932 240 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 AC018644.1-201ENST00000429934 551 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 ARL4AP4-201ENST00000434170 518 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.42□□□□□ -1.54
BRCA1P38398 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.42□□□□□ -1.54
BRCA1P38398 RPL7P15-201ENST00000461190 712 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 RPS20P4-201ENST00000461659 355 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 AC020890.1-201ENST00000491837 504 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
BRCA1P38398 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 RNA5SP73-201ENST00000516744 108 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.42□□□□□ -1.54
BRCA1P38398 CYCSP40-201ENST00000575927 294 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.42□□□□□ -1.54
BRCA1P38398 BNIP3P11-201ENST00000603878 563 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 RLIMP1-201ENST00000339626 1680 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.42□□□□□ -1.54
BRCA1P38398 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 AL445487.1-201ENST00000415694 1580 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 XKRY2-202ENST00000623874 1581 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 XKRY-202ENST00000624960 1581 ntBASIC5.42□□□□□ -1.54
BRCA1P38398 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRCA1P38398 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.41□□□□□ -1.54
BRCA1P38398 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.41□□□□□ -1.54
BRCA1P38398 RPS3AP12-201ENST00000443616 753 ntBASIC5.41□□□□□ -1.54
BRCA1P38398 AL157884.3-201ENST00000448273 1184 ntBASIC5.41□□□□□ -1.54
BRCA1P38398 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.41□□□□□ -1.54
BRCA1P38398 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.41□□□□□ -1.54
BRCA1P38398 AC099522.1-202ENST00000514718 367 ntBASIC5.41□□□□□ -1.54
BRCA1P38398 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.41□□□□□ -1.54
BRCA1P38398 AC012314.7-201ENST00000619693 93 ntBASIC5.41□□□□□ -1.54
BRCA1P38398 AL445363.3-201ENST00000623080 671 ntBASIC5.41□□□□□ -1.54
BRCA1P38398 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRCA1P38398 AC233968.1-201ENST00000611212 1300 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms