Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL121950.1-201ENST00000624993 2077 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 ADAM5-202ENST00000399789 1942 ntBASIC5.6□□□□□ -1.51
CIITAP33076 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CIITAP33076 AC004817.4-201ENST00000602396 3625 ntBASIC5.6□□□□□ -1.51
CIITAP33076 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.6□□□□□ -1.51
CIITAP33076 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CIITAP33076 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CIITAP33076 RN7SKP149-201ENST00000363008 344 ntBASIC5.6□□□□□ -1.51
CIITAP33076 SNORA73.1-201ENST00000363107 205 ntBASIC5.6□□□□□ -1.51
CIITAP33076 RNU6-1000P-201ENST00000391066 106 ntBASIC5.6□□□□□ -1.51
CIITAP33076 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
CIITAP33076 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.6□□□□□ -1.51
CIITAP33076 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 QRSL1P2-201ENST00000418582 964 ntBASIC5.6□□□□□ -1.51
CIITAP33076 ARL2BPP3-201ENST00000421226 480 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AL512661.1-201ENST00000434586 1253 ntBASIC5.6□□□□□ -1.51
CIITAP33076 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.6□□□□□ -1.51
CIITAP33076 PRPF38AP2-201ENST00000438179 851 ntBASIC5.6□□□□□ -1.51
CIITAP33076 MTND1P26-201ENST00000440488 538 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC112498.1-201ENST00000444401 332 ntBASIC5.6□□□□□ -1.51
CIITAP33076 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.6□□□□□ -1.51
CIITAP33076 SBDSP1-204ENST00000453858 737 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.6□□□□□ -1.51
CIITAP33076 snoU13.20-201ENST00000459180 104 ntBASIC5.6□□□□□ -1.51
CIITAP33076 RPL23AP56-201ENST00000460778 453 ntBASIC5.6□□□□□ -1.51
CIITAP33076 RN7SL517P-201ENST00000462240 305 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC114322.1-201ENST00000506771 926 ntBASIC5.6□□□□□ -1.51
CIITAP33076 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 MTCO3P27-201ENST00000514397 196 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.6□□□□□ -1.51
CIITAP33076 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.6□□□□□ -1.51
CIITAP33076 SOX5P1-201ENST00000524155 1127 ntBASIC5.6□□□□□ -1.51
CIITAP33076 PCNPP1-201ENST00000552501 511 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC009117.1-201ENST00000563948 554 ntBASIC5.6□□□□□ -1.51
CIITAP33076 BGLT3-201ENST00000564523 994 ntBASIC5.6□□□□□ -1.51
CIITAP33076 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.6□□□□□ -1.51
CIITAP33076 AL049539.1-201ENST00000611964 459 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 MIR6730-201ENST00000622213 67 ntBASIC5.6□□□□□ -1.51
CIITAP33076 CR381572.2-201ENST00000624852 397 ntBASIC5.6□□□□□ -1.51
CIITAP33076 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 AL031595.2-201ENST00000624215 19071 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AC011755.1-201ENST00000623763 2049 ntBASIC5.6□□□□□ -1.51
CIITAP33076 AL450345.1-202ENST00000605741 3881 ntBASIC5.6□□□□□ -1.51
CIITAP33076 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.6□□□□□ -1.51
CIITAP33076 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CIITAP33076 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CIITAP33076 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.6□□□□□ -1.51
CIITAP33076 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.59□□□□□ -1.51
CIITAP33076 AC011447.7-201ENST00000624228 1590 ntBASIC5.59□□□□□ -1.51
CIITAP33076 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.59□□□□□ -1.51
CIITAP33076 AC132825.1-201ENST00000463573 2247 ntBASIC5.59□□□□□ -1.51
CIITAP33076 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 RNA5SP345-201ENST00000410646 108 ntBASIC5.59□□□□□ -1.51
CIITAP33076 BTF3P9-201ENST00000418784 283 ntBASIC5.59□□□□□ -1.51
CIITAP33076 HMGN2P27-201ENST00000427352 270 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.59□□□□□ -1.51
CIITAP33076 AC007559.1-201ENST00000428736 355 ntBASIC5.59□□□□□ -1.51
CIITAP33076 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.59□□□□□ -1.51
CIITAP33076 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.59□□□□□ -1.51
CIITAP33076 MOB1AP2-201ENST00000446060 614 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 AC000111.2-201ENST00000448200 210 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 RPS3AP41-201ENST00000462701 778 ntBASIC5.59□□□□□ -1.51
CIITAP33076 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.59□□□□□ -1.51
CIITAP33076 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.59□□□□□ -1.51
CIITAP33076 AC109635.6-201ENST00000525487 1113 ntBASIC5.59□□□□□ -1.51
CIITAP33076 BRD9P1-201ENST00000529855 560 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.59□□□□□ -1.51
CIITAP33076 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.59□□□□□ -1.51
CIITAP33076 EDDM3DP-201ENST00000554692 434 ntBASIC5.59□□□□□ -1.51
CIITAP33076 YWHAZP1-201ENST00000556286 722 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC233266.2-201ENST00000567067 528 ntBASIC5.59□□□□□ -1.51
CIITAP33076 MIR4436B2-201ENST00000581415 91 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.59□□□□□ -1.51
CIITAP33076 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.59□□□□□ -1.51
CIITAP33076 MIR4436B1-201ENST00000583272 91 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC020910.3-201ENST00000603701 874 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AP004372.1-201ENST00000604842 844 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AC087783.2-201ENST00000605070 562 ntBASIC5.59□□□□□ -1.51
CIITAP33076 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 AC138965.3-201ENST00000623875 498 ntBASIC5.59□□□□□ -1.51
CIITAP33076 AP000648.2-201ENST00000624182 404 ntBASIC5.59□□□□□ -1.51
CIITAP33076 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.59□□□□□ -1.51
CIITAP33076 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CIITAP33076 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms