Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-1129P-201ENST00000515964 104 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC109635.6-201ENST00000525487 1113 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AP003461.1-201ENST00000528866 78 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC6A4P31645 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 NBR2-204ENST00000587322 63 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 VN1R74P-201ENST00000613259 503 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC015712.7-201ENST00000615211 635 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC011472.4-201ENST00000615848 491 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC109583.2-201ENST00000617367 129 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 MIR6837-201ENST00000620884 64 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC119674.1-212ENST00000641155 993 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC6A4P31645 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC6A4P31645 AC004076.2-201ENST00000620532 3323 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
SLC6A4P31645 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC6A4P31645 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC6A4P31645 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 OR9K1P-201ENST00000326513 941 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL035419.1-201ENST00000397037 564 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 ERHP2-201ENST00000402323 299 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 MIR1286-201ENST00000408112 78 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 MIR1302-8-201ENST00000408342 128 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC105402.1-201ENST00000413336 545 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 VN1R108P-201ENST00000431580 830 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL590399.4-201ENST00000436561 601 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL353093.1-201ENST00000441292 436 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC02210-201ENST00000444561 288 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL606490.1-201ENST00000452266 765 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 MTND2P28-201ENST00000457540 1044 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC107015.1-201ENST00000466902 747 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 RPF2P2-201ENST00000504693 896 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AP004607.2-201ENST00000533949 322 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC002400.1-201ENST00000569310 726 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC015688.2-201ENST00000584523 262 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 VN1R83P-201ENST00000595685 445 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 AC104446.1-201ENST00000613728 1321 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 AC007490.1-201ENST00000624321 703 ntBASIC5.61□□□□□ -1.51
SLC6A4P31645 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SLC6A4P31645 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC6A4P31645 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC6A4P31645 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC6A4P31645 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A4P31645 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 PABPC1P6-201ENST00000445594 1829 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC6A4P31645 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC6A4P31645 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC6A4P31645 AL445523.1-201ENST00000451184 1362 ntBASIC5.6□□□□□ -1.51
SLC6A4P31645 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC6A4P31645 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms