Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 LINC00622-201ENST00000562811 1570 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AMZ2P2-201ENST00000406819 1057 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC9P31274 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC9P31274 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC9P31274 RNU7-157P-201ENST00000459600 66 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 SEPT7P6-201ENST00000469999 1143 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC9P31274 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC9P31274 AC105137.1-201ENST00000484355 562 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC9P31274 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC9P31274 ACTR6P1-201ENST00000514311 1104 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 AP003730.1-201ENST00000524605 285 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC9P31274 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC9P31274 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC9P31274 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC9P31274 MIR3908-201ENST00000579798 126 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC117490.2-201ENST00000610042 594 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 ZYXP1-201ENST00000617638 118 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC006213.5-201ENST00000619673 288 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 AC104820.1-201ENST00000624183 307 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 MIR3653-201ENST00000625572 110 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC9P31274 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 AC093671.1-201ENST00000624981 2929 ntBASIC6.03□□□□□ -1.44
HOXC9P31274 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC9P31274 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC9P31274 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC9P31274 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 CASC19-206ENST00000641028 1430 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 AL589826.1-201ENST00000340697 249 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 RNU1-132P-201ENST00000364300 164 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 SNRPFP1-201ENST00000414761 252 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC9P31274 AL358176.3-201ENST00000420757 454 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 KCTD10P1-201ENST00000434203 625 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 MAPRE1P3-201ENST00000435438 796 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AC104651.2-201ENST00000447549 528 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC9P31274 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC9P31274 UQCRHP4-201ENST00000471686 272 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC9P31274 AP003168.1-201ENST00000530091 307 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AC025423.2-201ENST00000537570 439 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC9P31274 AC091979.2-201ENST00000607514 214 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 AC096586.2-201ENST00000610260 441 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
HOXC9P31274 EIF2AP4-201ENST00000424793 1781 ntBASIC6.02□□□□□ -1.45
HOXC9P31274 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC9P31274 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HOXC9P31274 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC9P31274 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC9P31274 AC011755.1-201ENST00000623763 2049 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 DHX9P1-201ENST00000436565 3076 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC9P31274 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 UBBP2-201ENST00000376781 231 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 SNORA37-201ENST00000384504 129 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AL589994.1-201ENST00000404962 340 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 RPS21P8-201ENST00000413365 247 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC9P31274 NPM1P26-201ENST00000426339 738 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC9P31274 OR4C10P-201ENST00000434991 931 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 DEFB109A-201ENST00000482450 265 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 SNORA31.9-201ENST00000516429 84 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC9P31274 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 AC015912.2-201ENST00000571053 181 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 IPO5P1-202ENST00000600039 287 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AL162574.2-201ENST00000614618 657 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AC006065.6-201ENST00000625201 545 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 RNA5SP196-201ENST00000625967 102 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 AL139254.3-201ENST00000641097 674 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC9P31274 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
HOXC9P31274 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.01□□□□□ -1.45
HOXC9P31274 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXC9P31274 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms