Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CD40LGP29965 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD40LGP29965 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 MAPK10-263ENST00000641052 4307 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CD40LGP29965 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40LGP29965 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40LGP29965 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CD40LGP29965 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 MIR133B-201ENST00000362210 119 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 SNORA67-201ENST00000384423 137 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.23□□□□□ -1.73
CD40LGP29965 RN7SKP59-201ENST00000410520 314 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.23□□□□□ -1.73
CD40LGP29965 LINC00993-201ENST00000420453 540 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 TRGV7-201ENST00000427089 353 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 YWHAEP5-201ENST00000431545 765 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 SCAND3P1-201ENST00000439854 1060 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.23□□□□□ -1.73
CD40LGP29965 PPIAP20-201ENST00000449839 135 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC069277.2-201ENST00000454211 432 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40LGP29965 RN7SL547P-201ENST00000490793 290 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 RNA5SP446-201ENST00000515955 82 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 SNORD116-26-201ENST00000516006 96 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 RNA5SP497-201ENST00000516081 97 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 RNA5SP373-201ENST00000517271 95 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40LGP29965 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CD40LGP29965 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40LGP29965 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.23□□□□□ -1.73
CD40LGP29965 SUGT1P3-202ENST00000604259 383 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC004948.1-201ENST00000609858 672 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 RPSAP73-201ENST00000614820 330 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC026368.1-201ENST00000614934 690 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC022960.2-201ENST00000616300 666 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.23□□□□□ -1.73
CD40LGP29965 AL359757.1-201ENST00000623176 255 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 AC011266.1-201ENST00000624119 3569 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 CASC19-284ENST00000642142 1868 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 AC097504.1-201ENST00000515103 2415 ntBASIC4.23□□□□□ -1.73
CD40LGP29965 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD40LGP29965 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CD40LGP29965 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 RNU6-697P-201ENST00000363348 107 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 RNA5SP22-201ENST00000365393 109 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.22□□□□□ -1.73
CD40LGP29965 AC093655.2-201ENST00000425735 631 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 DPY19L1P2-201ENST00000426647 915 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.22□□□□□ -1.73
CD40LGP29965 AC012075.1-201ENST00000436549 580 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CD40LGP29965 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 AL606490.1-201ENST00000452266 765 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC139783.2-201ENST00000504847 1145 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 IGLV2-28-201ENST00000520681 304 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 OR5M7P-201ENST00000526140 972 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40LGP29965 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 BLZF2P-201ENST00000553776 1130 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC124068.1-201ENST00000563131 678 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 CYP4A43P-201ENST00000568156 121 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC008536.1-201ENST00000602872 669 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC034236.3-201ENST00000605999 461 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AC000068.2-201ENST00000608816 460 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 AL592494.3-201ENST00000609485 464 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.22□□□□□ -1.73
CD40LGP29965 CASC19-264ENST00000641912 1184 ntBASIC4.22□□□□□ -1.73
CD40LGP29965 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.22□□□□□ -1.73
CD40LGP29965 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.22□□□□□ -1.73
CD40LGP29965 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40LGP29965 AL356317.1-201ENST00000396110 1436 ntBASIC4.21□□□□□ -1.73
CD40LGP29965 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CD40LGP29965 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40LGP29965 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40LGP29965 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
CD40LGP29965 RN7SKP160-201ENST00000363804 340 ntBASIC4.21□□□□□ -1.74
CD40LGP29965 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms