Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 AC092162.3-201ENST00000624511 1624 ntBASIC7.3□□□□□ -1.24
RFX1P22670 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
RFX1P22670 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RFX1P22670 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX1P22670 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RFX1P22670 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 AC013488.1-201ENST00000526618 1838 ntBASIC7.29□□□□□ -1.24
RFX1P22670 PABPC1P8-201ENST00000452851 2086 ntBASIC7.29□□□□□ -1.24
RFX1P22670 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.29□□□□□ -1.24
RFX1P22670 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 RNA5SP188-201ENST00000362916 129 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RNA5SP333-201ENST00000363466 118 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RNA5SP334-201ENST00000364825 118 ntBASIC7.29□□□□□ -1.24
RFX1P22670 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 Y_RNA.450-201ENST00000384198 113 ntBASIC7.29□□□□□ -1.24
RFX1P22670 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RFX1P22670 HMGB1P17-201ENST00000403495 628 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AL133260.1-201ENST00000405720 405 ntBASIC7.29□□□□□ -1.24
RFX1P22670 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RN7SKP266-201ENST00000410232 287 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RPS3AP3-201ENST00000411933 242 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 MTCYBP24-201ENST00000420387 1106 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 SDCBPP2-201ENST00000424643 885 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 SNRPEP7-201ENST00000438350 220 ntBASIC7.29□□□□□ -1.24
RFX1P22670 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 AL512605.1-202ENST00000441919 381 ntBASIC7.29□□□□□ -1.24
RFX1P22670 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.29□□□□□ -1.24
RFX1P22670 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 MEMO1P3-201ENST00000459811 302 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RN7SL83P-201ENST00000468131 297 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RN7SL654P-201ENST00000479178 292 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC106872.3-201ENST00000495104 446 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 AC108078.1-201ENST00000508073 725 ntBASIC7.29□□□□□ -1.24
RFX1P22670 NDUFB4P2-201ENST00000509515 391 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC117522.1-201ENST00000509821 380 ntBASIC7.29□□□□□ -1.24
RFX1P22670 SNX18P23-201ENST00000510867 677 ntBASIC7.29□□□□□ -1.24
RFX1P22670 PTGES3P3-201ENST00000511479 482 ntBASIC7.29□□□□□ -1.24
RFX1P22670 RNU6-430P-201ENST00000517078 107 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 PMS2P3-207ENST00000529061 717 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.29□□□□□ -1.24
RFX1P22670 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX1P22670 SULT1C2P1-202ENST00000562418 459 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 AC137800.2-201ENST00000574375 120 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 AC115085.1-201ENST00000588924 229 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 AL499605.1-201ENST00000604628 403 ntBASIC7.29□□□□□ -1.24
RFX1P22670 CYCSP1-201ENST00000604815 315 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC103710.4-201ENST00000609301 899 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AC015712.7-201ENST00000615211 635 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AL354718.1-201ENST00000619764 589 ntBASIC7.29□□□□□ -1.24
RFX1P22670 DUXAP9-208ENST00000622815 614 ntBASIC7.29□□□□□ -1.24
RFX1P22670 SNX18P10-201ENST00000625014 519 ntBASIC7.29□□□□□ -1.24
RFX1P22670 AP001052.1-201ENST00000626421 99 ntBASIC7.29□□□□□ -1.24
RFX1P22670 SNORA16A-202ENST00000628458 135 ntBASIC7.29□□□□□ -1.24
RFX1P22670 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 AC006378.2-201ENST00000623178 2476 ntBASIC7.29□□□□□ -1.24
RFX1P22670 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 AP002001.2-201ENST00000529025 1469 ntBASIC7.29□□□□□ -1.24
RFX1P22670 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX1P22670 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RFX1P22670 AL034370.1-201ENST00000397254 1590 ntBASIC7.29□□□□□ -1.24
RFX1P22670 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX1P22670 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RFX1P22670 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RFX1P22670 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 MIR1305-201ENST00000408300 86 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms