Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 BNIP3P6-201ENST00000549284 499 ntBASIC7.84□□□□□ -1.15
RNF40O75150 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 MIR3167-201ENST00000579623 85 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.84□□□□□ -1.15
RNF40O75150 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 AL451054.1-201ENST00000621770 772 ntBASIC7.84□□□□□ -1.15
RNF40O75150 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 AC011592.1-201ENST00000624647 3634 ntBASIC7.84□□□□□ -1.15
RNF40O75150 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RNF40O75150 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
RNF40O75150 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
RNF40O75150 AP000866.6-201ENST00000638898 3579 ntBASIC7.84□□□□□ -1.16
RNF40O75150 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.84□□□□□ -1.16
RNF40O75150 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
RNF40O75150 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF40O75150 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
RNF40O75150 MROH3P-201ENST00000435735 2676 ntBASIC7.83□□□□□ -1.16
RNF40O75150 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF40O75150 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RNF40O75150 SNORA10B-201ENST00000384458 133 ntBASIC7.83□□□□□ -1.16
RNF40O75150 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 AC068138.1-201ENST00000412635 217 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF40O75150 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 GAPDHP73-201ENST00000423411 1007 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF40O75150 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 CDC42P2-201ENST00000448566 569 ntBASIC7.83□□□□□ -1.16
RNF40O75150 OR52I1-201ENST00000450052 1050 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 ST13P21-201ENST00000453250 1098 ntBASIC7.83□□□□□ -1.16
RNF40O75150 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 OR7E62P-201ENST00000456741 477 ntBASIC7.83□□□□□ -1.16
RNF40O75150 TUBBP11-201ENST00000472255 252 ntBASIC7.83□□□□□ -1.16
RNF40O75150 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF40O75150 AC104564.1-201ENST00000493028 407 ntBASIC7.83□□□□□ -1.16
RNF40O75150 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 AC096754.1-201ENST00000508904 818 ntBASIC7.83□□□□□ -1.16
RNF40O75150 PGAM4P2-201ENST00000512491 721 ntBASIC7.83□□□□□ -1.16
RNF40O75150 Y_RNA.668-201ENST00000516233 93 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AC009812.2-201ENST00000517657 457 ntBASIC7.83□□□□□ -1.16
RNF40O75150 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF40O75150 NRBF2P4-201ENST00000520874 850 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AC022861.1-201ENST00000522981 663 ntBASIC7.83□□□□□ -1.16
RNF40O75150 OR7E87P-201ENST00000532397 929 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF40O75150 AC126177.6-201ENST00000550420 1009 ntBASIC7.83□□□□□ -1.16
RNF40O75150 OR5AH1P-201ENST00000595968 283 ntBASIC7.83□□□□□ -1.16
RNF40O75150 AL121985.2-201ENST00000621192 555 ntBASIC7.83□□□□□ -1.16
RNF40O75150 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 AC012213.2-201ENST00000562917 4597 ntBASIC7.83□□□□□ -1.16
RNF40O75150 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 AP000766.1-201ENST00000561746 4140 ntBASIC7.83□□□□□ -1.16
RNF40O75150 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.83□□□□□ -1.16
RNF40O75150 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF40O75150 AC032011.1-201ENST00000611703 1549 ntBASIC7.83□□□□□ -1.16
RNF40O75150 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF40O75150 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF40O75150 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF40O75150 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RNF40O75150 DDX50P1-201ENST00000438163 2400 ntBASIC7.82□□□□□ -1.16
RNF40O75150 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms