Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC5.38□□□□□ -1.55
PAX4O43316 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.38□□□□□ -1.55
PAX4O43316 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC5.38□□□□□ -1.55
PAX4O43316 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC5.38□□□□□ -1.55
PAX4O43316 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC5.38□□□□□ -1.55
PAX4O43316 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.38□□□□□ -1.55
PAX4O43316 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 MTCO1P14-201ENST00000441695 1559 ntBASIC5.38□□□□□ -1.55
PAX4O43316 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PAX4O43316 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.38□□□□□ -1.55
PAX4O43316 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 LRRC2-AS1-201ENST00000599511 2291 ntBASIC5.37□□□□□ -1.55
PAX4O43316 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PAX4O43316 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 AC009229.4-201ENST00000623854 1947 ntBASIC5.37□□□□□ -1.55
PAX4O43316 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-1298P-201ENST00000362456 101 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-81P-201ENST00000365608 104 ntBASIC5.37□□□□□ -1.55
PAX4O43316 Y_RNA.376-201ENST00000365638 108 ntBASIC5.37□□□□□ -1.55
PAX4O43316 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-338P-201ENST00000383888 105 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-31P-201ENST00000384388 108 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-1093P-201ENST00000391194 107 ntBASIC5.37□□□□□ -1.55
PAX4O43316 DSTNP4-201ENST00000399472 474 ntBASIC5.37□□□□□ -1.55
PAX4O43316 KRT18P52-201ENST00000404956 846 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RN7SKP89-201ENST00000410774 242 ntBASIC5.37□□□□□ -1.55
PAX4O43316 BCRP8-201ENST00000412037 255 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC074085.1-201ENST00000413598 418 ntBASIC5.37□□□□□ -1.55
PAX4O43316 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 PYHIN5P-201ENST00000431627 723 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RPEP2-201ENST00000432149 701 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RPSAP32-201ENST00000432681 526 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AL606752.1-201ENST00000435442 666 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AL356276.2-201ENST00000435919 558 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 AL731892.1-201ENST00000437364 1192 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC099799.1-201ENST00000439809 192 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AL137074.1-201ENST00000442640 465 ntBASIC5.37□□□□□ -1.55
PAX4O43316 OSTCP8-201ENST00000445117 448 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RPL39P38-201ENST00000467018 153 ntBASIC5.37□□□□□ -1.55
PAX4O43316 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PAX4O43316 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 RPS29P26-201ENST00000477483 171 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RN7SL635P-201ENST00000492123 296 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 HMGN1P16-201ENST00000508308 283 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 SCARNA20.1-201ENST00000516009 138 ntBASIC5.37□□□□□ -1.55
PAX4O43316 RNU6-1220P-201ENST00000517126 108 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.37□□□□□ -1.55
PAX4O43316 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC5.37□□□□□ -1.55
PAX4O43316 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.37□□□□□ -1.55
PAX4O43316 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 BNIP3P6-201ENST00000549284 499 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.37□□□□□ -1.55
PAX4O43316 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 AC136944.5-201ENST00000573021 151 ntBASIC5.37□□□□□ -1.55
PAX4O43316 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 MIR3689C-201ENST00000581239 72 ntBASIC5.37□□□□□ -1.55
PAX4O43316 MIR544B-201ENST00000582372 78 ntBASIC5.37□□□□□ -1.55
PAX4O43316 MIR5690-201ENST00000583739 73 ntBASIC5.37□□□□□ -1.55
PAX4O43316 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.37□□□□□ -1.55
PAX4O43316 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.37□□□□□ -1.55
PAX4O43316 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.37□□□□□ -1.55
PAX4O43316 SNX29P2-204ENST00000603801 875 ntBASIC5.37□□□□□ -1.55
PAX4O43316 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.37□□□□□ -1.55
PAX4O43316 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms