Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SKP278-201ENST00000410504 342 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 GSTM3P2-201ENST00000412746 530 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 RSU1P3-201ENST00000412878 835 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 BX510359.2-201ENST00000417920 305 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 OR2X1P-201ENST00000421144 687 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC004074.1-201ENST00000421810 1063 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AL450263.2-201ENST00000439400 589 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC073648.4-201ENST00000442655 781 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 RPL31P44-201ENST00000447680 377 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 HIGD1AP8-201ENST00000453927 274 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 ISCUP1-201ENST00000454451 448 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 RN7SL329P-201ENST00000467740 299 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC104763.1-201ENST00000475274 360 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC008897.1-201ENST00000494006 347 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.82□□□□□ -1.8
SDCBPO00560 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 AP001922.4-201ENST00000526967 290 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 AC016180.1-201ENST00000567945 403 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC013244.1-201ENST00000604279 193 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AP002360.3-201ENST00000607673 710 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 AC133644.2-201ENST00000608142 540 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 MIR6853-201ENST00000619642 74 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SDCBPO00560 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 MTCO1P22-201ENST00000604619 1360 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.81□□□□□ -1.8
SDCBPO00560 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SDCBPO00560 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SDCBPO00560 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SDCBPO00560 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC233289.1-201ENST00000403700 508 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.81□□□□□ -1.8
SDCBPO00560 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 SKP1P3-201ENST00000429280 487 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 PSMD10P3-201ENST00000437000 448 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 RPL7P33-201ENST00000444159 742 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 RPL7P61-201ENST00000451721 751 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 AL645937.3-201ENST00000453647 936 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 RPS3AP41-201ENST00000462701 778 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.81□□□□□ -1.8
SDCBPO00560 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.81□□□□□ -1.8
SDCBPO00560 AL110118.1-201ENST00000553543 400 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.81□□□□□ -1.8
SDCBPO00560 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 CASC19-222ENST00000641321 1173 ntBASIC3.81□□□□□ -1.8
SDCBPO00560 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDCBPO00560 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.81□□□□□ -1.8
SDCBPO00560 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
SDCBPO00560 AC132825.1-201ENST00000463573 2247 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDCBPO00560 AC010300.1-201ENST00000600671 5134 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDCBPO00560 CDC27P2-201ENST00000425026 1922 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 ZNF137P-201ENST00000456718 1920 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDCBPO00560 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.8□□□□□ -1.8
SDCBPO00560 RNA5SP52-201ENST00000362448 134 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 AL109941.1-201ENST00000401925 229 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 RN7SKP100-201ENST00000411258 284 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 AL356968.2-201ENST00000412769 1257 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 RANP7-201ENST00000418085 644 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.8□□□□□ -1.8
SDCBPO00560 AC104837.2-201ENST00000427236 424 ntBASIC3.8□□□□□ -1.8
SDCBPO00560 AC073335.1-201ENST00000427776 363 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms