Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MIR4528-201ENST00000577763 90 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AL357080.1-201ENST00000617394 239 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AL354718.1-201ENST00000619764 589 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 HYDIN2-203ENST00000614586 13885 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 DCAF13P1-201ENST00000495256 1330 ntBASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.27□□□□□ -1.24
TMEM88BA6NKF7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 Y_RNA.582-201ENST00000391023 95 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 SNORA11-201ENST00000408789 128 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 VDAC1P2-201ENST00000423609 850 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 DUTP4-201ENST00000424782 475 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 VDAC1P6-201ENST00000430062 855 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 MORF4-201ENST00000447135 971 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC004924.1-201ENST00000480160 781 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC099521.1-201ENST00000482557 334 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC010343.2-201ENST00000510162 224 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 DEFB131D-201ENST00000526803 184 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC068135.2-201ENST00000569293 1028 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 SNORA70D-201ENST00000578836 135 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 FKBP1AP1-201ENST00000594588 318 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC112187.2-201ENST00000604345 283 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 FAM27E4-201ENST00000605259 342 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AF250324.2-201ENST00000608299 610 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC008115.3-201ENST00000614874 549 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC108479.2-201ENST00000617314 601 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AL121890.2-201ENST00000617644 465 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 MIR7159-201ENST00000620587 66 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AL592429.1-201ENST00000403909 1473 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 CASC19-204ENST00000641001 2055 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 AC016745.2-201ENST00000608834 3443 ntBASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TMEM88BA6NKF7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 COL6A4P1-202ENST00000487147 4317 ntBASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TMEM88BA6NKF7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms