Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RNU6-1017P-201ENST00000363613 106 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 Y_RNA.159-201ENST00000363674 87 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 SNORA19-201ENST00000384737 128 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RNU6-308P-201ENST00000390957 107 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RPL23AP29-201ENST00000397284 453 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP206-201ENST00000410823 293 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RNU6-1148P-201ENST00000410992 104 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC000089.1-201ENST00000424559 801 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC239798.3-201ENST00000454459 408 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RPS14P8-201ENST00000478778 369 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC099521.1-201ENST00000482557 334 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC016687.1-201ENST00000482574 353 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 MRPS35P2-201ENST00000508242 191 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 SCARNA6-201ENST00000515982 265 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP256-201ENST00000517201 314 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC027308.1-201ENST00000517993 110 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 RNU6-988P-201ENST00000519081 107 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 SNRPGP18-201ENST00000553000 214 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AL845552.1-201ENST00000556820 323 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC023827.2-201ENST00000566880 1061 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC137590.2-201ENST00000619709 240 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AP006248.2-201ENST00000623309 592 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 Z69720.2-201ENST00000624755 279 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC005858.3-201ENST00000624756 589 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC069542.2-201ENST00000624816 216 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AL008638.3-201ENST00000623027 5182 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 AC104837.1-201ENST00000444644 1587 ntBASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HPS5Q9UPZ3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AL592429.1-201ENST00000403909 1473 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP44-201ENST00000363602 316 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP130-201ENST00000364924 301 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RNU6-533P-201ENST00000384144 107 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RNU6-1297P-201ENST00000384415 104 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RNU6-1068P-201ENST00000410958 103 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 OR5W1P-201ENST00000423705 938 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 FO393419.3-201ENST00000428741 282 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AC133104.1-201ENST00000429100 218 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 SETP20-201ENST00000457046 852 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 MTATP8P1-201ENST00000467115 207 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 HMGB3P15-201ENST00000507326 574 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RPL7L1P13-201ENST00000511702 739 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 HSD3BP3-201ENST00000514706 994 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RNU6-388P-201ENST00000517012 105 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 RNU6-389P-201ENST00000517048 105 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 CDC42P3-201ENST00000518493 633 ntBASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.2□□□□□ -1.1
HPS5Q9UPZ3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms