Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RBMY2EP-202ENST00000456360 940 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RNU7-63P-201ENST00000459054 62 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RPS10P20-201ENST00000494130 463 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC106872.3-201ENST00000495104 446 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 FAM206BP-201ENST00000510179 541 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 OR4P1P-201ENST00000530808 1136 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AL049870.4-201ENST00000555741 486 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 NQO1-205ENST00000561500 891 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 ULK4P1-202ENST00000565174 503 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 ACTG1P15-201ENST00000570019 1063 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-89P-201ENST00000606519 100 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC004908.1-201ENST00000606572 541 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AP005329.3-201ENST00000609924 686 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 MIR8082-201ENST00000612488 81 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AP004607.9-201ENST00000618202 316 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 CASC19-232ENST00000641480 1244 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 CDY19P-201ENST00000411668 1613 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 CDY18P-201ENST00000438294 1609 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 HSP90AA2P-201ENST00000530115 2196 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AP004289.2-201ENST00000444413 1457 ntBASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 LINC00561-201ENST00000565815 2738 ntBASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.21□□□□□ -0.93
TRIM35Q9UPQ4 RNU12-2P-201ENST00000364789 156 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-432P-201ENST00000384196 109 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 MIR16-1-201ENST00000385271 89 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 SOD2P1-201ENST00000396543 562 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 RNU4-26P-201ENST00000410270 107 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 OR51A3P-201ENST00000413596 924 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL590664.1-201ENST00000448065 339 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 ST13P21-201ENST00000453250 1098 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 CR383656.1-201ENST00000484916 377 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 RNU6-1023P-201ENST00000516137 106 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 IGHVII-51-2-201ENST00000519778 259 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC130366.1-201ENST00000526505 1192 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 NCAPGP2-201ENST00000557911 754 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC126323.4-201ENST00000566935 234 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 MIR3128-201ENST00000581957 66 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 SNORD91A-202ENST00000609620 191 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC116165.3-201ENST00000614524 400 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC008115.3-201ENST00000614874 549 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC104447.1-201ENST00000624214 2124 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL512643.1-201ENST00000635735 524 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AC119744.1-201ENST00000454746 1715 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL442128.2-201ENST00000620246 1824 ntBASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 ERG-205ENST00000398910 4954 ntTSL 5 BASIC9.21□□□□□ -0.94
TRIM35Q9UPQ4 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TRIM35Q9UPQ4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms