Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNORA11-201ENST00000408789 128 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 RNU2-50P-201ENST00000410494 143 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 RPS26P4-201ENST00000431743 355 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC008072.1-201ENST00000434254 824 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC009963.2-201ENST00000453431 138 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC063943.1-201ENST00000465434 453 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC112206.1-201ENST00000468416 477 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC022795.1-201ENST00000473808 480 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC068587.1-201ENST00000483613 781 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 SCARNA22-201ENST00000503991 125 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 FKBP1BP1-201ENST00000553366 325 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 SNORD39.2-201ENST00000579995 76 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 MIR4737-201ENST00000583979 81 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AL512782.1-201ENST00000603093 364 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AL137072.1-201ENST00000603444 466 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 RNF138P2-201ENST00000603490 592 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AL391358.1-201ENST00000605342 190 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC011815.3-201ENST00000624194 473 ntBASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA3Q9UI47 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 UGT2B26P-201ENST00000508672 1613 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 DNAJC19P7-201ENST00000428811 344 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AL589765.3-201ENST00000446084 462 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 MTND4LP12-201ENST00000448237 295 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 MTND6P32-201ENST00000457611 483 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 RN7SKP46-201ENST00000515942 234 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AP001880.2-201ENST00000538233 448 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 OR7M1P-201ENST00000608946 533 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 CASC19-204ENST00000641001 2055 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 SALL4P2-201ENST00000423288 2910 ntBASIC5.68□□□□□ -1.5
CTNNA3Q9UI47 AL445487.1-201ENST00000415694 1580 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 RNA5SP191-201ENST00000362585 102 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AP000580.1-201ENST00000404439 358 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 RN7SKP100-201ENST00000411258 284 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 GLUD1P9-201ENST00000420997 1173 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 OR2B7P-201ENST00000429302 934 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 NDUFA12P1-201ENST00000455914 406 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC091868.1-201ENST00000508746 304 ntBASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.67□□□□□ -1.5
CTNNA3Q9UI47 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms