Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HCFC2P1-201ENST00000392864 1592 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AP001002.1-201ENST00000625148 1513 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 RNU1-130P-201ENST00000363930 160 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 RPS4XP18-201ENST00000495480 763 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 RN7SKP92-201ENST00000517266 244 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AC090151.1-201ENST00000520784 730 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AL445423.1-201ENST00000609941 536 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AL353684.1-201ENST00000622677 1120 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AC005086.4-201ENST00000623065 213 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 AC139769.1-204ENST00000472297 1931 ntBASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NPC1L1Q9UHC9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AL049693.1-201ENST00000402760 611 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AL139095.3-201ENST00000419672 1203 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AL356387.2-201ENST00000422272 243 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 MTCYBP21-201ENST00000443300 1113 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 DHFRP3-201ENST00000455595 559 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AP002981.1-201ENST00000517692 975 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AP005262.1-201ENST00000582646 997 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AC009950.2-201ENST00000636548 183 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 OR2L1P-202ENST00000641567 1023 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPC1L1Q9UHC9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 RN7SKP167-201ENST00000411047 285 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC007064.3-201ENST00000422608 359 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 CDY14P-201ENST00000431260 1014 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC013410.1-201ENST00000436223 1232 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 CDY12P-201ENST00000440679 1015 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 CDY13P-201ENST00000445813 1015 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 CDY23P-201ENST00000451661 1014 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 RPL10P17-201ENST00000453852 316 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 RPL23AP65-201ENST00000475608 468 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC021733.2-201ENST00000518830 497 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AL590392.1-201ENST00000604960 446 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AL161912.3-201ENST00000605404 628 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC006338.2-201ENST00000616864 791 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC006065.6-201ENST00000625201 545 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC132825.8-201ENST00000640783 297 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 HSPD1P14-201ENST00000432666 1618 ntBASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPC1L1Q9UHC9 EOGT-210ENST00000615922 1931 ntBASIC6.09□□□□□ -1.43
NPC1L1Q9UHC9 RNA5SP307-201ENST00000362863 116 ntBASIC6.09□□□□□ -1.43
NPC1L1Q9UHC9 RNA5SP479-201ENST00000364858 117 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms