Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AL096803.2-201ENST00000450032 677 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS11Q9H270 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC018552.1-201ENST00000562099 811 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 TXNP4-201ENST00000575018 310 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 MIR548S-201ENST00000581352 82 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 AL031985.2-201ENST00000600955 480 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AL136363.2-201ENST00000604173 851 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 AC021749.1-201ENST00000604322 607 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC072039.2-201ENST00000608883 439 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 AL021918.2-201ENST00000613415 194 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 MIR6133-201ENST00000617057 108 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS11Q9H270 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS11Q9H270 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC010266.2-201ENST00000564741 3255 ntBASIC5.84□□□□□ -1.47
VPS11Q9H270 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS11Q9H270 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS11Q9H270 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS11Q9H270 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VPS11Q9H270 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.84□□□□□ -1.48
VPS11Q9H270 MFSD8-239ENST00000641590 2479 ntBASIC5.84□□□□□ -1.48
VPS11Q9H270 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
VPS11Q9H270 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
VPS11Q9H270 VN2R3P-201ENST00000422626 1412 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 GNL2P1-201ENST00000451274 2190 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 RNU6-797P-201ENST00000363101 109 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 TCEA1P4-201ENST00000415066 844 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 RPS4XP5-201ENST00000419038 768 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 RPL7AP51-201ENST00000422016 760 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AL445928.1-201ENST00000435545 222 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 RPL5P25-201ENST00000441148 775 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AL357520.1-201ENST00000441557 453 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 TRIM60P16-201ENST00000444048 694 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AC022431.1-201ENST00000450941 438 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS11Q9H270 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC147055.3-201ENST00000510547 851 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS11Q9H270 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 ANP32BP3-201ENST00000559213 706 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC087481.2-201ENST00000565492 330 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AL512347.1-201ENST00000566420 503 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC022884.3-201ENST00000579571 248 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AC134669.1-201ENST00000581275 672 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 WBP1LP12-201ENST00000604449 331 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AC007038.2-201ENST00000608095 740 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AL135999.3-201ENST00000610501 812 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AC079395.2-201ENST00000610982 737 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 MIR6823-201ENST00000622118 61 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS11Q9H270 AC093849.1-201ENST00000563631 2209 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 AP000473.2-201ENST00000602659 1537 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
VPS11Q9H270 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
VPS11Q9H270 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS11Q9H270 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS11Q9H270 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VPS11Q9H270 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms