Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 MAPK10-290ENST00000641237 2826 ntBASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTNAP3Q9BZ76 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC008627.1-201ENST00000517511 1704 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 Y_RNA.148-201ENST00000363557 117 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RNU1-39P-201ENST00000383897 165 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RPL7P58-201ENST00000402913 758 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RNA5SP498-201ENST00000411342 120 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL593856.1-201ENST00000419949 805 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RPS3P2-201ENST00000421346 701 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC005517.2-201ENST00000424673 553 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 ISCA1P6-201ENST00000427740 390 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL512605.1-202ENST00000441919 381 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC012512.1-201ENST00000446594 718 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RPS3AP50-201ENST00000487064 803 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RNU4-49P-201ENST00000516080 140 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 RN7SKP233-201ENST00000517005 110 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 SNORA25.17-201ENST00000517184 124 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 IGKV2D-38-201ENST00000518423 240 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AP005639.1-201ENST00000526939 192 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 OR6M3P-201ENST00000531567 700 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL109766.1-201ENST00000555080 552 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC016727.2-201ENST00000603988 621 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AP001330.4-201ENST00000604350 154 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC078938.1-201ENST00000620993 318 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AL034408.1-201ENST00000637712 664 ntBASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTNAP3Q9BZ76 AC021242.1-201ENST00000507315 2035 ntBASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 CTAGE3P-201ENST00000454280 2404 ntBASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 Y_RNA.135-201ENST00000363439 95 ntBASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 Y_RNA.158-201ENST00000363651 101 ntBASIC6.84□□□□□ -1.31
CNTNAP3Q9BZ76 SNORA58B-201ENST00000364259 136 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms