Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BNIP3P26-201ENST00000600827 554 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ELOCP34-201ENST00000604436 327 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 PCMTD1P7-201ENST00000634506 357 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC116618.1-201ENST00000634617 774 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC007114.2-201ENST00000576014 4281 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 SAMM50P1-201ENST00000455403 1399 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 Z83820.1-201ENST00000456978 1499 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC119674.1-202ENST00000641333 1860 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 RNU6-931P-201ENST00000363850 107 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 RNU4-34P-201ENST00000410431 124 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 TCEA1P4-201ENST00000415066 844 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 OR5AW1P-201ENST00000426334 1006 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 UBE2V1P8-201ENST00000437166 265 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 PTMAP6-201ENST00000439110 327 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 RPL36AP39-201ENST00000445859 318 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 RN7SL826P-201ENST00000479724 288 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC147055.4-201ENST00000504399 745 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 WBP1LP4-201ENST00000505043 344 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AL671862.1-201ENST00000515851 349 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC112191.2-201ENST00000522428 333 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC018558.5-201ENST00000565840 952 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 MRPS21P9-201ENST00000571150 257 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC068790.7-201ENST00000602347 528 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC068276.1-201ENST00000605793 379 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 RN7SL787P-201ENST00000613000 284 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 AC025594.3-201ENST00000613068 790 ntBASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNGAP1Q96PV0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 VN2R3P-201ENST00000422626 1412 ntBASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 AP001541.1-201ENST00000623322 1904 ntBASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNGAP1Q96PV0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SNORD8-201ENST00000363915 110 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 SNORA75-201ENST00000384158 137 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 RNA5SP251-201ENST00000410614 137 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AC010385.1-201ENST00000412374 256 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 NRBF2P2-201ENST00000413087 861 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AC010975.2-201ENST00000427781 588 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AL512593.1-201ENST00000444758 779 ntBASIC6.89□□□□□ -1.31
SYNGAP1Q96PV0 AC093392.2-201ENST00000450682 337 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms