Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 HMGB1P13-201ENST00000406019 642 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 HMGB3P31-201ENST00000413333 595 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 RPL7P34-201ENST00000433316 712 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC097499.1-201ENST00000444277 208 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC073909.1-201ENST00000447112 999 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AL591363.1-201ENST00000450091 483 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AL133244.1-201ENST00000456007 258 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 OR2AO1P-201ENST00000476497 403 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 RPL21P131-201ENST00000497298 483 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC005351.1-201ENST00000511152 786 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 RBM22P1-201ENST00000578589 1214 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 CCDC58P3-201ENST00000590792 430 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AP002906.1-201ENST00000603405 233 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC107952.2-201ENST00000606048 486 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AL121890.3-201ENST00000618494 516 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC073569.3-201ENST00000619055 682 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 SAMMSON-209ENST00000641222 1100 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 OR11H2-202ENST00000641517 1085 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC004817.4-201ENST00000602396 3625 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 RARSP1-201ENST00000542842 1418 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 AC008079.2-201ENST00000623543 20396 ntBASIC5.38□□□□□ -1.55
VPS50Q96JG6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS50Q96JG6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 OR9K1P-201ENST00000326513 941 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RNA5SP132-201ENST00000364725 118 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RNU4-7P-201ENST00000364758 141 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RNU4-2-201ENST00000365668 141 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 SNORD116-12-201ENST00000384468 92 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC005522.1-201ENST00000395416 346 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 MTCO2P31-201ENST00000402702 684 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AL021331.1-201ENST00000402817 582 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC211486.3-201ENST00000412694 621 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 RPL22P18-201ENST00000417197 377 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AL662874.1-201ENST00000426065 230 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 SUMO2P3-201ENST00000438311 288 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 LINC02210-201ENST00000444561 288 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 SEPT14P24-201ENST00000447236 180 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 MYO5BP2-201ENST00000449815 1277 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 OR51B8P-201ENST00000449892 769 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RPL7P45-201ENST00000455851 743 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 NDUFA5P9-201ENST00000472609 340 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RPL7P39-201ENST00000481157 744 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 RPS7P6-201ENST00000485777 579 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 RN7SL346P-201ENST00000491561 294 ntBASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS50Q96JG6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms