Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MTND3P16-201ENST00000452205 344 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 PCNPP5-201ENST00000452246 481 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 HDAC1P1-201ENST00000455482 1445 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 RPL7P22-201ENST00000466005 733 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC128713.1-201ENST00000471495 306 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 FTH1P23-201ENST00000492727 550 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 FAM206BP-201ENST00000510179 541 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 BTG4P1-201ENST00000510421 183 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 NARSP2-201ENST00000518524 679 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 MIR3614-201ENST00000581261 86 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC098479.1-201ENST00000609225 154 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 7SK.12-201ENST00000612820 244 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AL512624.1-201ENST00000613638 469 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AL049641.1-201ENST00000441055 1948 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC020978.8-201ENST00000571975 3022 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ASNSP3-201ENST00000451989 1306 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 RNU6-1188P-201ENST00000363795 107 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 TMSB4XP8-201ENST00000402089 135 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 RNU4-26P-201ENST00000410270 107 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 TMSB4XP6-201ENST00000415187 135 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 TMSB4XP1-201ENST00000424567 135 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC244505.2-201ENST00000435089 759 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC092809.1-201ENST00000441469 474 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 RN7SL492P-201ENST00000460700 295 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC097493.1-201ENST00000463958 372 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC015911.1-201ENST00000495111 156 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 PGAM4P2-201ENST00000512491 721 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AP002373.2-201ENST00000541631 1060 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 POLR2KP1-201ENST00000553226 168 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AL162632.2-201ENST00000553933 399 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 RPSAP66-201ENST00000592196 606 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 AL136097.3-201ENST00000611097 505 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 uc_338.11-201ENST00000619132 160 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 MIR193BHG-214ENST00000641765 509 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 BRD7P1-201ENST00000557705 1915 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 NLRP3P1-201ENST00000622303 1785 ntBASIC7.81□□□□□ -1.16
LRCH3Q96II8 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.81□□□□□ -1.16
LRCH3Q96II8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LRCH3Q96II8 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LRCH3Q96II8 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LRCH3Q96II8 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms