Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC092999.1-201ENST00000624004 1924 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 MTND5P33-201ENST00000571250 1450 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AL031123.2-201ENST00000563225 3325 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.45□□□□□ -1.22
HLA-CQ95604 RNU6-996P-201ENST00000365438 107 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 RNU6-831P-201ENST00000384548 107 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 RNU6-193P-201ENST00000410977 107 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC114482.1-201ENST00000418010 247 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 RPS24P8-201ENST00000431490 402 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AC119618.1-201ENST00000434191 222 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 HSD3BP3-201ENST00000514706 994 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 RNU6-410P-201ENST00000517006 107 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AC104986.1-201ENST00000517978 436 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AC009902.1-201ENST00000519351 183 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 MRPS16P1-201ENST00000523462 412 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 NCAPGP2-201ENST00000557911 754 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 SULT1C2P1-202ENST00000562418 459 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC012175.1-201ENST00000603755 531 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC022418.1-201ENST00000624118 445 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AC010325.3-201ENST00000641084 394 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-CQ95604 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
HLA-CQ95604 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
HLA-CQ95604 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC090643.1-201ENST00000623600 3100 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.45□□□□□ -1.22
HLA-CQ95604 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 Y_RNA.112-201ENST00000363250 102 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 RNU1-55P-201ENST00000365510 158 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-CQ95604 MIR575-201ENST00000385013 94 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 MIR514A2-201ENST00000385131 88 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 MIR514A3-201ENST00000385132 88 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
HLA-CQ95604 RNU4-26P-201ENST00000410270 107 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 TPMTP2-201ENST00000414372 726 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC005517.2-201ENST00000424673 553 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC019097.1-201ENST00000424783 735 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC073069.1-201ENST00000428657 441 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.44□□□□□ -1.22
HLA-CQ95604 FAM103A2P-201ENST00000444122 354 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 RPS23P9-201ENST00000448848 438 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 RPL7AP71-201ENST00000451120 739 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC239798.3-201ENST00000454459 408 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 RPL23AP12-201ENST00000467573 473 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 VN1R17P-201ENST00000472048 1090 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC114797.1-201ENST00000514003 728 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 SMURF2P1-201ENST00000514992 481 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC022616.3-201ENST00000523940 148 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC008126.1-201ENST00000549019 480 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AL669831.4-202ENST00000590817 238 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms