Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 RPS17P8-201ENST00000434525 335 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 GTF3AP5-201ENST00000442645 697 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 BTF3P6-201ENST00000448054 499 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 Z95152.1-201ENST00000453556 656 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 RPL23AP53-201ENST00000521854 457 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 SNORA74C-1-201ENST00000580726 201 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 FAM60CP-201ENST00000591086 664 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC005962.2-201ENST00000611427 652 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 TLK1P1-201ENST00000456760 2440 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 AC245100.2-201ENST00000454544 1679 ntBASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.12□□□□□ -1.59
COLGALT1Q8NBJ5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC006484.1-201ENST00000435086 1884 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RNU4-23P-201ENST00000362839 140 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RNU1-82P-201ENST00000390851 165 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AL162591.2-201ENST00000449634 317 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 PPIAP21-201ENST00000464473 501 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RN7SL558P-201ENST00000497468 299 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC020937.1-201ENST00000519677 1013 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RN7SL652P-201ENST00000577769 300 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 MIR4675-201ENST00000577898 77 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC069061.3-201ENST00000582254 823 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC005191.1-201ENST00000603950 358 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 AC120338.1-201ENST00000625074 1541 ntBASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
COLGALT1Q8NBJ5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 RNA5SP479-201ENST00000364858 117 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 PEX12P1-201ENST00000400284 1048 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 CTSL3P-202ENST00000412179 788 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 SEPT7P8-201ENST00000413308 775 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AC140479.3-201ENST00000418944 1126 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AC023141.6-201ENST00000429418 337 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 MAPRE1P3-201ENST00000435438 796 ntBASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COLGALT1Q8NBJ5 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms