Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC009313.2-201ENST00000417893 1941 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC009229.4-201ENST00000623854 1947 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL080315.1-201ENST00000406055 466 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL603766.1-201ENST00000407763 664 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SKP240-201ENST00000410583 375 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL512504.1-201ENST00000415494 778 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 VN1R37P-201ENST00000419096 748 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC108075.1-201ENST00000424692 529 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 DNAJA1P5-201ENST00000440278 943 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL353898.1-201ENST00000444055 238 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RPL36AP39-201ENST00000445859 318 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC104651.2-201ENST00000447549 528 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 MTND2P3-201ENST00000452458 470 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 TPRKBP1-201ENST00000456243 481 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RPL23AP37-201ENST00000479658 549 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SL727P-201ENST00000482164 296 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 DEFB109D-201ENST00000529497 240 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC012414.2-201ENST00000559474 187 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 EIF1P5-201ENST00000585002 234 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC005021.1-201ENST00000608730 355 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 uc_338.18-201ENST00000615451 175 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC003001.2-201ENST00000616294 831 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC090527.3-201ENST00000619041 548 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC015804.1-201ENST00000622935 435 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC004232.3-201ENST00000622977 525 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC010329.2-201ENST00000595195 2737 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 AC018529.3-201ENST00000624212 2254 ntBASIC4.04□□□□□ -1.76
CCDC71LQ8N9Z2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AL445437.1-201ENST00000623157 3087 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 SNORD96B-201ENST00000386148 79 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 RNA5SP372-201ENST00000390836 115 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AL391422.1-201ENST00000402155 436 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 RNU6-603P-201ENST00000411403 107 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AL451139.1-201ENST00000434718 346 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 MTCYBP29-201ENST00000436327 1006 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC012075.1-201ENST00000436549 580 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 OR7E125P-201ENST00000443450 846 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 TCEA1P1-201ENST00000449716 880 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 CALM1P2-201ENST00000452941 448 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 FGF7P3-201ENST00000454645 303 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC108022.1-201ENST00000493466 478 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC092349.1-201ENST00000504903 310 ntBASIC4.03□□□□□ -1.76
CCDC71LQ8N9Z2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms