Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 GAPDHP24-201ENST00000328713 983 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 SNORA64.1-201ENST00000362600 132 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RNU6-492P-201ENST00000363035 104 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RN7SKP162-201ENST00000363605 345 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RNA5SP500-201ENST00000364486 119 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 SNRPEP6-201ENST00000407465 277 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 GSTM3P2-201ENST00000412746 530 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 CEACAMP8-201ENST00000413902 580 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC019050.1-201ENST00000418508 492 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RPS17P17-201ENST00000419392 409 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL022400.1-201ENST00000423946 935 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL390023.1-201ENST00000428836 262 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 THAP5P1-201ENST00000439089 262 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC118469.1-201ENST00000442943 488 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 MTND2P4-201ENST00000445034 1004 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RPS17P15-201ENST00000475609 349 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RPL7P6-201ENST00000480903 738 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 NCOR1P1-202ENST00000486162 291 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 HMGB3P13-201ENST00000511263 607 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 RNA5SP34-201ENST00000516887 130 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC103881.1-201ENST00000603476 538 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC079395.2-201ENST00000610982 737 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL021918.2-201ENST00000613415 194 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AC234782.5-201ENST00000617723 324 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 AL353743.4-201ENST00000422653 1547 ntBASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNPOQ8N3V7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AL512646.1-201ENST00000269395 1077 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 RNA5SP375-201ENST00000362975 119 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 Y_RNA.318-201ENST00000365131 97 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AL021407.1-201ENST00000404531 386 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AL136133.1-201ENST00000413694 376 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 NPM1P24-201ENST00000428039 894 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 RPS27AP15-201ENST00000447672 466 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 SBDSP1-204ENST00000453858 737 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 SIAH1P1-201ENST00000479411 923 ntBASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNPOQ8N3V7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms