Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC234772.1-201ENST00000377927 937 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 SNORA66-201ENST00000384792 133 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 RNA5SP241-201ENST00000391326 114 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 ATP5HP3-201ENST00000396994 486 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AP002784.2-201ENST00000397300 549 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL109941.1-201ENST00000401925 229 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 FO393414.1-201ENST00000428697 1184 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 RHOT1P3-201ENST00000436571 331 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC004854.1-201ENST00000440356 349 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 RPL34P20-201ENST00000442771 351 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL035551.1-201ENST00000446931 348 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 CYCSP42-201ENST00000450823 238 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 RPL35AP28-201ENST00000459730 331 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC096741.1-201ENST00000472250 846 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC104982.1-201ENST00000478775 574 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC097173.1-201ENST00000505862 819 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC069306.1-201ENST00000507006 843 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC020937.1-201ENST00000519677 1013 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC010376.1-201ENST00000522101 334 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AP001922.4-201ENST00000526967 290 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL049870.4-201ENST00000555741 486 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL158211.1-201ENST00000566763 763 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 RN7SL290P-201ENST00000578661 300 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC011840.5-201ENST00000582125 771 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC018754.1-201ENST00000607486 925 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL627230.1-201ENST00000613077 211 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL591926.8-201ENST00000616876 211 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 AL512427.1-201ENST00000618593 349 ntBASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.4□□□□□ -1.54
SCN4BQ8IWT1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 HSPD1P11-201ENST00000508643 1702 ntBASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN4BQ8IWT1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RN7SKP103-201ENST00000363848 320 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RN7SKP113-201ENST00000363891 295 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 SNORA51.8-201ENST00000384234 132 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RNU6-1005P-201ENST00000384519 107 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL445183.3-201ENST00000414168 502 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 PTP4A1P7-201ENST00000423476 514 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 HSPE1P16-201ENST00000426640 348 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AP000936.3-201ENST00000438127 255 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC069540.1-201ENST00000446320 988 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 PSMC1P13-201ENST00000458195 985 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RPL21P18-201ENST00000469899 480 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC025459.1-201ENST00000504072 156 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC010350.1-201ENST00000504908 231 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC118282.1-201ENST00000506408 765 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 RNU6-1308P-201ENST00000516817 103 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 OR7E128P-201ENST00000532736 1024 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 NPM1P35-201ENST00000533043 868 ntBASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN4BQ8IWT1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms