Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RN7SL52P-201ENST00000584271 284 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.5□□□□□ -1.69
VSX2P58304 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.5□□□□□ -1.69
VSX2P58304 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.5□□□□□ -1.69
VSX2P58304 MIR6780A-201ENST00000615089 68 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RN7SL722P-201ENST00000617780 284 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RN7SL565P-201ENST00000618246 284 ntBASIC4.5□□□□□ -1.69
VSX2P58304 AC011815.3-201ENST00000624194 473 ntBASIC4.5□□□□□ -1.69
VSX2P58304 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 SALL4P2-201ENST00000423288 2910 ntBASIC4.5□□□□□ -1.69
VSX2P58304 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
VSX2P58304 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.49□□□□□ -1.69
VSX2P58304 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VSX2P58304 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
VSX2P58304 MIR192-201ENST00000384915 110 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AL590762.2-201ENST00000395798 571 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AC007068.1-201ENST00000396690 844 ntBASIC4.49□□□□□ -1.69
VSX2P58304 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
VSX2P58304 RN7SKP267-201ENST00000410381 285 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AC140479.3-201ENST00000418944 1126 ntBASIC4.49□□□□□ -1.69
VSX2P58304 VN1R37P-201ENST00000419096 748 ntBASIC4.49□□□□□ -1.69
VSX2P58304 OR6C71P-201ENST00000432580 913 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AC092447.2-201ENST00000435487 669 ntBASIC4.49□□□□□ -1.69
VSX2P58304 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
VSX2P58304 RPS6P2-201ENST00000454208 705 ntBASIC4.49□□□□□ -1.69
VSX2P58304 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.49□□□□□ -1.69
VSX2P58304 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 RN7SKP46-201ENST00000515942 234 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.49□□□□□ -1.69
VSX2P58304 AC008126.1-201ENST00000549019 480 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.49□□□□□ -1.69
VSX2P58304 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.49□□□□□ -1.69
VSX2P58304 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.49□□□□□ -1.69
VSX2P58304 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.49□□□□□ -1.69
VSX2P58304 MIR4330-201ENST00000579077 105 ntBASIC4.49□□□□□ -1.69
VSX2P58304 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.49□□□□□ -1.69
VSX2P58304 AL133406.3-201ENST00000606817 541 ntBASIC4.49□□□□□ -1.69
VSX2P58304 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.49□□□□□ -1.69
VSX2P58304 AC015804.1-201ENST00000622935 435 ntBASIC4.49□□□□□ -1.69
VSX2P58304 AP003400.2-201ENST00000624036 666 ntBASIC4.49□□□□□ -1.69
VSX2P58304 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
VSX2P58304 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.49□□□□□ -1.69
VSX2P58304 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
VSX2P58304 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.49□□□□□ -1.69
VSX2P58304 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VSX2P58304 AL121950.1-201ENST00000624993 2077 ntBASIC4.49□□□□□ -1.69
VSX2P58304 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 AL445487.1-201ENST00000415694 1580 ntBASIC4.48□□□□□ -1.69
VSX2P58304 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VSX2P58304 CASC19-206ENST00000641028 1430 ntBASIC4.48□□□□□ -1.69
VSX2P58304 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 AP001273.1-201ENST00000624493 3152 ntBASIC4.48□□□□□ -1.69
VSX2P58304 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.48□□□□□ -1.69
VSX2P58304 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VSX2P58304 AC079741.1-201ENST00000321498 212 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC008549.2-201ENST00000333482 706 ntBASIC4.48□□□□□ -1.69
VSX2P58304 RNU6-398P-201ENST00000384143 109 ntBASIC4.48□□□□□ -1.69
VSX2P58304 SNORA68.2-201ENST00000391263 128 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 ARL4AP5-201ENST00000404372 599 ntBASIC4.48□□□□□ -1.69
VSX2P58304 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.48□□□□□ -1.69
VSX2P58304 TMBIM7P-201ENST00000418074 855 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC069213.2-201ENST00000420238 366 ntBASIC4.48□□□□□ -1.69
VSX2P58304 GLUD1P9-201ENST00000420997 1173 ntBASIC4.48□□□□□ -1.69
VSX2P58304 RPS26P4-201ENST00000431743 355 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.48□□□□□ -1.69
VSX2P58304 CEACAMP6-201ENST00000452007 574 ntBASIC4.48□□□□□ -1.69
VSX2P58304 RPS29P33-201ENST00000456717 146 ntBASIC4.48□□□□□ -1.69
VSX2P58304 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.48□□□□□ -1.69
VSX2P58304 AC090142.1-201ENST00000465776 462 ntBASIC4.48□□□□□ -1.69
VSX2P58304 AC112206.1-201ENST00000468416 477 ntBASIC4.48□□□□□ -1.69
VSX2P58304 RN7SL738P-201ENST00000470264 297 ntBASIC4.48□□□□□ -1.69
VSX2P58304 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms