Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.19□□□□□ -1.58
NR1H2P55055 RNA5SP362-201ENST00000516048 118 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 RNU6-941P-201ENST00000516346 108 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AC100784.1-201ENST00000522790 310 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AC124293.1-201ENST00000530034 493 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AL356801.1-201ENST00000559320 294 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AP000919.1-202ENST00000581139 1264 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.19□□□□□ -1.58
NR1H2P55055 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.19□□□□□ -1.58
NR1H2P55055 NTAN1P1-201ENST00000603150 646 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AC090912.3-201ENST00000609775 533 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 AC126544.2-201ENST00000625174 749 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.19□□□□□ -1.58
NR1H2P55055 ATE1-AS1-202ENST00000636460 506 ntBASIC5.19□□□□□ -1.58
NR1H2P55055 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NR1H2P55055 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NR1H2P55055 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NR1H2P55055 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NR1H2P55055 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NR1H2P55055 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
NR1H2P55055 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NR1H2P55055 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NR1H2P55055 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 OR13C1P-202ENST00000641378 2919 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 AL049737.1-201ENST00000413920 1403 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NR1H2P55055 SELENOWP1-201ENST00000322792 252 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 VDAC2P1-201ENST00000399358 958 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 MIR1178-201ENST00000408396 91 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 RPL12P9-201ENST00000412942 488 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 RPL35AP3-201ENST00000414680 288 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC104333.2-201ENST00000422630 192 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AP001324.1-201ENST00000428553 399 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC126120.1-201ENST00000431082 470 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NR1H2P55055 RPL19P16-201ENST00000433839 588 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC009263.1-201ENST00000441193 1239 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 CYCSP24-201ENST00000445119 316 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 RN7SL269P-201ENST00000467795 305 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 RPL7P6-201ENST00000480903 738 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
NR1H2P55055 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 RN7SL57P-201ENST00000493687 290 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AL136038.1-201ENST00000497246 351 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC090638.1-201ENST00000498296 909 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC010374.1-201ENST00000503762 1237 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC091912.1-201ENST00000511351 248 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC110760.3-202ENST00000515177 371 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 CYCSP22-201ENST00000517555 339 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.18□□□□□ -1.58
NR1H2P55055 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 VN1R87P-201ENST00000596706 487 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 VN1R88P-201ENST00000596787 292 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.18□□□□□ -1.58
NR1H2P55055 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 AL021918.2-201ENST00000613415 194 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AL139407.1-201ENST00000613826 1175 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC022079.2-201ENST00000619739 566 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 uc_338.7-201ENST00000621834 124 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 OR4G3P-201ENST00000633500 913 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 AC013437.2-201ENST00000639587 677 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 LINC01808-202ENST00000641680 1116 ntBASIC5.18□□□□□ -1.58
NR1H2P55055 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NR1H2P55055 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.18□□□□□ -1.58
NR1H2P55055 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NR1H2P55055 AL360270.2-201ENST00000562952 5985 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms