Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 RNU6-481P-201ENST00000384194 107 ntBASIC5.59□□□□□ -1.51
COPB1P53618 MIR105-2-201ENST00000385083 81 ntBASIC5.59□□□□□ -1.51
COPB1P53618 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPB1P53618 SNORD65-201ENST00000391079 73 ntBASIC5.59□□□□□ -1.51
COPB1P53618 MIR1182-201ENST00000408363 97 ntBASIC5.59□□□□□ -1.51
COPB1P53618 NPM1P40-201ENST00000412758 733 ntBASIC5.59□□□□□ -1.51
COPB1P53618 TATDN1P1-201ENST00000414123 891 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.59□□□□□ -1.51
COPB1P53618 AL121878.1-201ENST00000418638 859 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC115285.1-201ENST00000424879 736 ntBASIC5.59□□□□□ -1.51
COPB1P53618 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 FAM96AP1-201ENST00000430879 482 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPB1P53618 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 AL031313.1-201ENST00000448435 256 ntBASIC5.59□□□□□ -1.51
COPB1P53618 RPL7P61-201ENST00000451721 751 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC093166.2-201ENST00000455969 1017 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 RN7SL441P-201ENST00000492388 296 ntBASIC5.59□□□□□ -1.51
COPB1P53618 MTCYBP35-201ENST00000503630 1137 ntBASIC5.59□□□□□ -1.51
COPB1P53618 RPS4XP20-201ENST00000505751 772 ntBASIC5.59□□□□□ -1.51
COPB1P53618 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.59□□□□□ -1.51
COPB1P53618 RPL23AP53-201ENST00000521854 457 ntBASIC5.59□□□□□ -1.51
COPB1P53618 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.59□□□□□ -1.51
COPB1P53618 AC087888.1-201ENST00000550884 1254 ntBASIC5.59□□□□□ -1.51
COPB1P53618 NDUFB4P11-201ENST00000560510 395 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 MIR4472-2-201ENST00000582069 67 ntBASIC5.59□□□□□ -1.51
COPB1P53618 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
COPB1P53618 AC234772.3-201ENST00000602277 528 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 AC073137.1-201ENST00000605636 634 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AL157392.4-201ENST00000609756 345 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AL359513.1-201ENST00000614364 557 ntBASIC5.59□□□□□ -1.51
COPB1P53618 RPSAP73-201ENST00000614820 330 ntBASIC5.59□□□□□ -1.51
COPB1P53618 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.59□□□□□ -1.51
COPB1P53618 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPB1P53618 AC120349.3-201ENST00000624377 529 ntBASIC5.59□□□□□ -1.51
COPB1P53618 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 AC132825.7-201ENST00000638744 335 ntBASIC5.59□□□□□ -1.51
COPB1P53618 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
COPB1P53618 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COPB1P53618 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COPB1P53618 AC007382.1-201ENST00000624376 2618 ntBASIC5.59□□□□□ -1.52
COPB1P53618 Z95331.1-201ENST00000623075 23112 ntBASIC5.58□□□□□ -1.52
COPB1P53618 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.58□□□□□ -1.52
COPB1P53618 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPB1P53618 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.58□□□□□ -1.52
COPB1P53618 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPB1P53618 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPB1P53618 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPB1P53618 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPB1P53618 RNU4-40P-201ENST00000364351 143 ntBASIC5.58□□□□□ -1.52
COPB1P53618 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPB1P53618 GSTA12P-201ENST00000402398 508 ntBASIC5.58□□□□□ -1.52
COPB1P53618 NUDT19P3-201ENST00000404698 555 ntBASIC5.58□□□□□ -1.52
COPB1P53618 RN7SKP278-201ENST00000410504 342 ntBASIC5.58□□□□□ -1.52
COPB1P53618 OR2AH1P-201ENST00000425717 928 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AL035246.1-201ENST00000433554 1255 ntBASIC5.58□□□□□ -1.52
COPB1P53618 SETP8-201ENST00000435341 628 ntBASIC5.58□□□□□ -1.52
COPB1P53618 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.58□□□□□ -1.52
COPB1P53618 ARF4P4-201ENST00000439608 520 ntBASIC5.58□□□□□ -1.52
COPB1P53618 MED6P1-201ENST00000439659 713 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.58□□□□□ -1.52
COPB1P53618 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.58□□□□□ -1.52
COPB1P53618 AC010374.1-201ENST00000503762 1237 ntBASIC5.58□□□□□ -1.52
COPB1P53618 BX510359.5-201ENST00000515651 304 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AP000916.1-201ENST00000533869 835 ntBASIC5.58□□□□□ -1.52
COPB1P53618 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AC127381.1-201ENST00000555979 939 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.58□□□□□ -1.52
COPB1P53618 AC069307.1-201ENST00000602820 447 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AL365400.2-201ENST00000605604 902 ntBASIC5.58□□□□□ -1.52
COPB1P53618 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 AC022079.1-201ENST00000621546 602 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AC138907.10-201ENST00000623708 983 ntBASIC5.58□□□□□ -1.52
COPB1P53618 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.58□□□□□ -1.52
COPB1P53618 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPB1P53618 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.58□□□□□ -1.52
COPB1P53618 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPB1P53618 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.58□□□□□ -1.52
COPB1P53618 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPB1P53618 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.58□□□□□ -1.52
COPB1P53618 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms