Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 AL590240.1-201ENST00000334118 313 ntBASIC4.43□□□□□ -1.7
RFC3P40938 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 RNU1-94P-201ENST00000362627 173 ntBASIC4.43□□□□□ -1.7
RFC3P40938 SNORA73.1-201ENST00000363107 205 ntBASIC4.43□□□□□ -1.7
RFC3P40938 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFC3P40938 U3.30-201ENST00000391308 210 ntBASIC4.43□□□□□ -1.7
RFC3P40938 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
RFC3P40938 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 RN7SKP100-201ENST00000411258 284 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 AC000111.2-201ENST00000448200 210 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 AC093166.2-201ENST00000455969 1017 ntBASIC4.43□□□□□ -1.7
RFC3P40938 MTCYBP14-201ENST00000457471 715 ntBASIC4.43□□□□□ -1.7
RFC3P40938 RPL7AP28-201ENST00000464513 571 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AC112206.1-201ENST00000468416 477 ntBASIC4.43□□□□□ -1.7
RFC3P40938 RN7SL860P-201ENST00000473738 223 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 AC073358.1-201ENST00000505671 684 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.43□□□□□ -1.7
RFC3P40938 AC113398.2-201ENST00000507630 558 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AC108043.1-201ENST00000512696 574 ntBASIC4.43□□□□□ -1.7
RFC3P40938 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.43□□□□□ -1.7
RFC3P40938 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.43□□□□□ -1.7
RFC3P40938 AC018442.3-201ENST00000523025 183 ntBASIC4.43□□□□□ -1.7
RFC3P40938 SOX5P1-201ENST00000524155 1127 ntBASIC4.43□□□□□ -1.7
RFC3P40938 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.43□□□□□ -1.7
RFC3P40938 SNORD91B-202ENST00000608459 222 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AC244517.3-201ENST00000616254 1235 ntBASIC4.43□□□□□ -1.7
RFC3P40938 AL121890.2-201ENST00000617644 465 ntBASIC4.43□□□□□ -1.7
RFC3P40938 MIR6853-201ENST00000619642 74 ntBASIC4.43□□□□□ -1.7
RFC3P40938 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.43□□□□□ -1.7
RFC3P40938 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
RFC3P40938 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.43□□□□□ -1.7
RFC3P40938 AC093775.1-201ENST00000624154 1868 ntBASIC4.43□□□□□ -1.7
RFC3P40938 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFC3P40938 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.42□□□□□ -1.7
RFC3P40938 AC123912.3-201ENST00000600907 1367 ntBASIC4.42□□□□□ -1.7
RFC3P40938 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 Y_RNA.62-201ENST00000362840 99 ntBASIC4.42□□□□□ -1.7
RFC3P40938 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFC3P40938 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFC3P40938 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 AC136624.1-201ENST00000400791 413 ntBASIC4.42□□□□□ -1.7
RFC3P40938 RN7SKP16-201ENST00000410180 299 ntBASIC4.42□□□□□ -1.7
RFC3P40938 RN7SKP106-201ENST00000410832 272 ntBASIC4.42□□□□□ -1.7
RFC3P40938 RSU1P3-201ENST00000412878 835 ntBASIC4.42□□□□□ -1.7
RFC3P40938 FAR2P2-201ENST00000413041 594 ntBASIC4.42□□□□□ -1.7
RFC3P40938 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
RFC3P40938 QRSL1P2-201ENST00000418582 964 ntBASIC4.42□□□□□ -1.7
RFC3P40938 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
RFC3P40938 FAR2P4-202ENST00000425399 584 ntBASIC4.42□□□□□ -1.7
RFC3P40938 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.42□□□□□ -1.7
RFC3P40938 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.42□□□□□ -1.7
RFC3P40938 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 SNORA26.10-201ENST00000516427 141 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.42□□□□□ -1.7
RFC3P40938 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFC3P40938 AC133555.2-201ENST00000550213 292 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AL512310.9-201ENST00000553311 948 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AC084759.1-201ENST00000561168 290 ntBASIC4.42□□□□□ -1.7
RFC3P40938 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms