Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC114546.3-201ENST00000623582 1734 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 RNA5SP305-201ENST00000362665 119 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 RNA5SP428-201ENST00000365129 132 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC019155.1-201ENST00000382242 574 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AL645927.1-201ENST00000396783 406 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AL021331.1-201ENST00000402817 582 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AL356981.1-201ENST00000454879 684 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 GYG1P1-201ENST00000460864 698 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 RN7SL517P-201ENST00000462240 305 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 SMARCE1P4-201ENST00000523647 241 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 SETP1-201ENST00000556014 845 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC090312.1-201ENST00000580637 348 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 MTCO3P22-201ENST00000603219 784 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC090525.3-201ENST00000605601 189 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC068870.2-201ENST00000620635 389 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AP002799.1-201ENST00000623552 423 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 CASC19-222ENST00000641321 1173 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HLA-DPA1P20036 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HLA-DPA1P20036 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPA1P20036 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 CYP1D1P-201ENST00000416662 1433 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPA1P20036 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DPA1P20036 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HLA-DPA1P20036 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 QRSL1P2-201ENST00000418582 964 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC093162.1-201ENST00000419682 124 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AL590623.1-201ENST00000427864 105 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 NPM1P24-201ENST00000428039 894 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 RPS26P4-201ENST00000431743 355 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 RHOT1P3-201ENST00000436571 331 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 GTF3AP5-201ENST00000442645 697 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC092647.3-201ENST00000443044 633 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AL137845.2-201ENST00000444292 988 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DPA1P20036 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 RPS4XP12-201ENST00000461747 709 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 RN7SL610P-201ENST00000463845 291 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 RN7SKP147-201ENST00000517154 244 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 HMGB1P46-201ENST00000520062 610 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 AL049870.4-201ENST00000555741 486 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC090515.3-201ENST00000560431 315 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DPA1P20036 AC019206.1-201ENST00000621938 425 ntBASIC5□□□□□ -1.61
HLA-DPA1P20036 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DPA1P20036 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DPA1P20036 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HLA-DPA1P20036 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DPA1P20036 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DPA1P20036 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
HLA-DPA1P20036 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms