Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 SNORD116-23-201ENST00000384645 92 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 RNA5SP178-201ENST00000410380 128 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 MTCO3P1-205ENST00000422088 832 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 USP9YP28-201ENST00000435142 589 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 NDUFS5P5-201ENST00000437256 321 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 FTLP8-201ENST00000446770 267 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 RANP2-201ENST00000456833 229 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 UBFD1P1-201ENST00000473259 814 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AF279873.1-201ENST00000523393 313 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AP000859.1-201ENST00000525536 307 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC027544.3-201ENST00000535082 757 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.1□□□□□ -1.27
ERCC3P19447 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 AL121579.2-201ENST00000555466 590 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 HNRNPCP1-201ENST00000556181 766 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 AC009120.3-201ENST00000563335 499 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 ROCK1P1-201ENST00000573767 549 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 NPIPB1P-202ENST00000588786 828 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC011497.2-201ENST00000600255 639 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 AC009027.1-201ENST00000604510 479 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC091946.2-201ENST00000606105 291 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AC126175.1-201ENST00000617041 758 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 AL031667.3-201ENST00000620124 655 ntBASIC7.1□□□□□ -1.27
ERCC3P19447 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC3P19447 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC3P19447 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC3P19447 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
ERCC3P19447 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC3P19447 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
ERCC3P19447 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC3P19447 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC3P19447 AF287957.1-201ENST00000607368 1595 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 AC024651.2-201ENST00000562480 2098 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 AC016716.1-201ENST00000265882 708 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 RNU1-146P-201ENST00000364015 165 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 RPL7P8-201ENST00000411964 730 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC3P19447 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC3P19447 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC3P19447 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 RPL23AP15-201ENST00000450202 459 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC3P19447 VPS25P1-201ENST00000455691 508 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC3P19447 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 HMGB1P44-201ENST00000508597 572 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 EIF3KP3-201ENST00000514461 639 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC3P19447 SCARNA18.1-201ENST00000516330 83 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC3P19447 AC093519.1-201ENST00000566109 298 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.09□□□□□ -1.27
ERCC3P19447 AC112220.3-201ENST00000605502 502 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.09□□□□□ -1.27
ERCC3P19447 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC3P19447 AP000254.1-201ENST00000609934 520 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 MIR6793-201ENST00000612376 63 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 AC234782.5-201ENST00000617723 324 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC3P19447 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms